SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001135175
Gene Symbol: NEDD1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.96944701C>A COSM2046888 SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8068 catctaAACAAACAa UGUUUGUU m8a Created HPSLB_1793_G2163.1_97338485
hsa-miR-6740-5p catctaaCCAAACaa AGUUUGGG m6b Disrupted HPSLB_1793_G2163.1_97338485
hsa-miR-659-3p catctAACCAAacaa CUUGGUUC m6b Disrupted HPSLB_1793_G2163.1_97338485
hsa-miR-487b-5p catcTAACCAaacaa GUGGUUAU m6b Disrupted HPSLB_1793_G2163.1_97338485
hsa-miR-487a-5p catcTAACCAaacaa GUGGUUAU m6b Disrupted HPSLB_1793_G2163.1_97338485
hsa-miR-8068 catctaAACAAACAa UGUUUGUU m8a Created HPSLB_1793_G2163.1_97338485
hsa-miR-6740-5p catctaaCCAAACaa AGUUUGGG m6b Disrupted HPSLB_1793_G2163.1_97338485
hsa-miR-659-3p catctAACCAAacaa CUUGGUUC m6b Disrupted HPSLB_1793_G2163.1_97338485
hsa-miR-487b-5p catcTAACCAaacaa GUGGUUAU m6b Disrupted HPSLB_1793_G2163.1_97338485
hsa-miR-487a-5p catcTAACCAaacaa GUGGUUAU m6b Disrupted HPSLB_1793_G2163.1_97338485

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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