SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0030545
Gene Symbol: NDFIP2
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr13:g.79482173A>G COSN15565160 C0010T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.79481344A>G COSM4641831 LIM2405 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-412-3p gaaGTGAAGagcttc ACUUCACC m6b Disrupted HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024
hsa-miR-6515-3p gaagTGAAGAGcttc UCUCUUCA m7b Disrupted HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024
hsa-miR-4268 gaagtGAGGAGCttc GGCUCCUC m7b Created HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024
hsa-miR-6796-3p gaagtgaAGAGCTTc GAAGCUCU m7b Disrupted HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024
hsa-miR-6837-3p gaAGTGAAGagcttc CCUUCACU m7b (m7b->m6b) HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024

Mutation Mutation ID Sample Name Cancer Type
chr13:g.79481328G>C COSM4641830 LIM2405 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-604 gctgcgGCAGCCaca AGGCUGCG m6b Created HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024
hsa-miR-647 gctgcgGCAGCCACa GUGGCUGC m8a Created HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024
hsa-miR-6886-5p gCTGCGGGagccaca CCCGCAGG m7a Disrupted HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024
hsa-miR-8057 gctgcggGAGCCACa GUGGCUCU m7a Disrupted HHKTA_47507_NM_019080|199|238|1.47110999575974|0.540914466948024

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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