SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_207481
Gene Symbol: NCKAP5
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.132687020G>A COSN7338444 8057783 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7855-5p cCTCACCAAcatagt UUGGUGAG m8a (m7a->m8a) HHFCT_83648_cluster-13916_12_8
hsa-miR-4781-3p cctcaCCAACATagt AAUGUUGG m7b Created HHFCT_83648_cluster-13916_12_8
hsa-miR-4792 cCTCACCGacatagt CGGUGAGC m7a Disrupted HHFCT_83648_cluster-13916_12_8
hsa-miR-598-5p ccTCACCGacatagt GCGGUGAU m6b Disrupted HHFCT_83648_cluster-13916_12_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.132672683C>T COSN5781559 HX24T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3117-5p atcAGTGTCatgctc AGACACUA m6b Created HHFKP_77738_cluster-13916_7_8
hsa-miR-183-5p atcaGTGCCATgctc UAUGGCAC m7b Disrupted HHFKP_77738_cluster-13916_7_8
hsa-miR-6797-3p atcagtGTCATGCtc UGCAUGAC m7b Created HHFCT_83642_cluster-13916_6_8
hsa-miR-6076 atcagtGTCATGCTc AGCAUGAC m8a Created HHFCT_83642_cluster-13916_6_8
hsa-miR-6797-3p atcagtGTCATGCtc UGCAUGAC m7b Created HHFKP_77738_cluster-13916_7_8
hsa-miR-6076 atcagtGTCATGCTc AGCAUGAC m8a Created HHFKP_77738_cluster-13916_7_8
hsa-miR-425-5p atcaGTGTCATgctc AAUGACAC m7b Created HHFKP_77738_cluster-13916_7_8
hsa-miR-183-5p atcaGTGCCATgctc UAUGGCAC m7b Disrupted HHFCT_83642_cluster-13916_6_8
hsa-miR-3117-5p atcAGTGTCatgctc AGACACUA m6b Created HHFCT_83642_cluster-13916_6_8
hsa-miR-425-5p atcaGTGTCATgctc AAUGACAC m7b Created HHFCT_83642_cluster-13916_6_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.132672043A>C COSN1788575 RK130_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-5p gtgaactCTTTATaa CAUAAAGU m6b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-583 gtgaaCTCTTTataa CAAAGAGG m6b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-5590-3p gtgaactCTTTATaa AAUAAAGU m6b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-4311 gtgaaCTCTTTataa GAAAGAGA m6b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-340-5p gtgaactCTTTATAa UUAUAAAG m7b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-142-5p gtgaactCTTTATaa CAUAAAGU m6b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-340-5p gtgaactCTTTATAa UUAUAAAG m7b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-4311 gtgaaCTCTTTataa GAAAGAGA m6b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-5590-3p gtgaactCTTTATaa AAUAAAGU m6b Created HHFCT_83639_cluster-13916_3_83
hsa-miR-583 gtgaaCTCTTTataa CAAAGAGG m6b Created HHFCT_83639_cluster-13916_3_83

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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