SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_002454 |
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Gene Symbol: | MTRR |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr5:g.7900075A>T | COSN8493170 | 2275_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-130b-5p | ttaaaGAAAGAGgat | ACUCUUUC | m7b | Disrupted | HHFCT_126739_cluster-17956_12_25 |
hsa-miR-6881-3p | ttaaagaAAGAGGAt | AUCCUCUU | m7b | Disrupted | HHFCT_126739_cluster-17956_12_25 |
hsa-miR-130b-5p | ttaaaGAAAGAGgat | ACUCUUUC | m7b | Disrupted | HHFKP_116745_cluster-17956_16_25 |
hsa-miR-6881-3p | ttaaagaAAGAGGAt | AUCCUCUU | m7b | Disrupted | HHFKP_116745_cluster-17956_16_25 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr5:g.7900023G>A | COSM1258056 | SJHGG029_R | [central_nervous_system][brain][glioma][astrocytoma_Grade_IV] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4659a-3p | tttaaaAGAAGAAAa | UUUCUUCU | m8a | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-4659b-3p | tttaaaAGAAGAAAa | UUUCUUCU | m8a | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-4778-3p | tttaaAAGAAGAaaa | UCUUCUUC | m7a | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-6875-3p | tttaaaaGAAGAAaa | AUUCUUCC | m6b | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr5:g.7900012C>T | COSM1070452 | TCGA-AP-A059-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3609 | accctggTCACTTTa | CAAAGUGA | m7b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-3677-5p | accctGGCCACTtta | CAGUGGCC | m7b | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-4435 | accCTGGCCActtta | AUGGCCAG | m7b | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-4796-3p | accctggCCACTTTa | UAAAGUGG | m7b | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-548ah-5p | accctggTCACTTTa | AAAAGUGA | m7b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-6753-5p | aCCCTGGTcacttta | CACCAGGG | m7b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr5:g.7899999A>G | COSM5002665 | PDA_084 | [pancreas][NS][carcinoma][ductal_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-181b-2-3p | agaagCAGTGAaaac | CUCACUGA | m6b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-181b-3p | agaagCAGTGAaaac | CUCACUGA | m6b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-335-3p | agaagcaATGAAAAc | UUUUUCAU | m7b | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-4317 | agaaGCAATGaaaac | ACAUUGCC | m6b | Disrupted | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-4420 | agaagCAGTGAaaac | GUCACUGA | m6b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-5096 | agaagcaGTGAAAac | GUUUCACC | m6b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-653-3p | agaagCAGTGAAaac | UUCACUGG | m7a | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-6890-3p | agaaGCAGTGaaaac | CCACUGCC | m6b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr5:g.7899990C>T | COSM3618086 | TCGA-FW-A3TV-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4735-5p | tgaaAAATTAGaagc | CCUAAUUU | m7b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-4775 | tgaAAAATTAgaagc | UUAAUUUU | m7b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |
hsa-miR-576-5p | tgaaaaATTAGAAgc | AUUCUAAU | m7b | Created | HHKTA_10337_NM_002454|2160|2199|6.40365527566005|0.745457851394586 |