SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0017143
Gene Symbol: MTR
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.236806207C>T COSM4487101 CSCC-20-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4423-3p tatTGCCTAagctga AUAGGCAC m6b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-4453 tattgcCCAAGCTga GAGCUUGG m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-4538 tattgcCCAAGCTga GAGCUUGG m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-635 tattGCCCAAGctga ACUUGGGC m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-6774-5p tattGCCCAAGctga ACUUGGGC m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-4423-3p tatTGCCTAagctga AUAGGCAC m6b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-4453 tattgcCCAAGCTga GAGCUUGG m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-4538 tattgcCCAAGCTga GAGCUUGG m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-635 tattGCCCAAGctga ACUUGGGC m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-6774-5p tattGCCCAAGctga ACUUGGGC m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236806192A>T COSM337654 LUAD-D01603 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1301-3p ttttAGCTGCActag UUGCAGCU m7b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-130a-3p ttttagcTGCACTag CAGUGCAA m6b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-130b-3p ttttagcTGCACTag CAGUGCAA m6b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-301a-3p ttttagcTGCACTag CAGUGCAA m6b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-301b-3p ttttagcTGCACTag CAGUGCAA m6b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-3666 ttttagcTGCACTag CAGUGCAA m6b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-3944-5p ttttaGCTGCACtag UGUGCAGC m7b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-4295 ttttagcTGCACTag CAGUGCAA m6b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-4473 ttttagcAGCACTAg CUAGUGCU m7b Disrupted HHFCT_15972_cluster-1135_8_8
hsa-miR-4671-3p ttttagcTGCACTAg UUAGUGCA m7b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-5047 ttttAGCTGCActag UUGCAGCU m7b Created HHFCT_15972_cluster-1135_8_8
hsa-miR-512-3p ttttagCAGCACTag AAGUGCUG m7b Disrupted HHFCT_15972_cluster-1135_8_8
hsa-miR-520f-3p ttttagcAGCACTag AAGUGCUU m6b Disrupted HHFCT_15972_cluster-1135_8_8
hsa-miR-1301-3p ttttAGCTGCActag UUGCAGCU m7b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-130a-3p ttttagcTGCACTag CAGUGCAA m6b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-130b-3p ttttagcTGCACTag CAGUGCAA m6b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-301a-3p ttttagcTGCACTag CAGUGCAA m6b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-301b-3p ttttagcTGCACTag CAGUGCAA m6b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-3666 ttttagcTGCACTag CAGUGCAA m6b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-3944-5p ttttaGCTGCACtag UGUGCAGC m7b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-4295 ttttagcTGCACTag CAGUGCAA m6b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-4473 ttttagcAGCACTAg CUAGUGCU m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-4671-3p ttttagcTGCACTAg UUAGUGCA m7b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-5047 ttttAGCTGCActag UUGCAGCU m7b Created HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-512-3p ttttagCAGCACTag AAGUGCUG m7b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222
hsa-miR-520f-3p ttttagcAGCACTag AAGUGCUU m6b Disrupted HHKTA_47837_NM_000254|697|736|1.47110999575974|0.349762685112222

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236803572C>T COSM220368 DLBCL-PatientG [haematopoietic_and_lymphoid_tissue][tonsil][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-221-5p gatcaTGCCAGGccg ACCUGGCA m7b Disrupted HHFCT_15968_cluster-1135_4_9
hsa-miR-3622b-5p gatCATGCCaggccg AGGCAUGG m6b Disrupted HHFCT_15968_cluster-1135_4_9
hsa-miR-4720-5p gatcATGCCAGGccg CCUGGCAU m8a Disrupted HHFCT_15968_cluster-1135_4_9
hsa-miR-4799-3p gatcATGCCAGgccg ACUGGCAU m7b Disrupted HHFCT_15968_cluster-1135_4_9
hsa-miR-5588-5p gatcATGCCAGgccg ACUGGCAU m7b Disrupted HHFCT_15968_cluster-1135_4_9
hsa-miR-6719-3p gatcATGTCAGgccg UCUGACAU m7b Created HHFCT_15968_cluster-1135_4_9
hsa-miR-8073 gatcaTGCCAGGccg ACCUGGCA m7b Disrupted HHFCT_15968_cluster-1135_4_9

Mutation Mutation ID Sample Name Cancer Type
chr1:g.236803568C>T COSM4472072 CSCC-49-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p taaagatCATGCCag AGGCAUGG m6b Disrupted HHFCT_15968_cluster-1135_4_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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