SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001135671
Gene Symbol: MSRA
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.10428190C>T COSM3269351 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-488-5p cgacATCTGGGaggg CCCAGAUA m7a Created HHFKP_141151_cluster-21830_11_45
hsa-miR-105-3p cgACATCCGggaggg ACGGAUGU m7b (m7b->m6b) HHFKP_141151_cluster-21830_11_45

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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