SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_032424
Gene Symbol: MSANTD4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.106009472A>G COSN5823042 SS6003133 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3074-3p aggTGATATaatgat GAUAUCAG m6b Disrupted HPTA2_346_G1054.1_105880207
hsa-miR-4528 aggtgaTATAATGAt UCAUUAUA m8a Disrupted HPTA2_346_G1054.1_105880207
hsa-miR-499a-3p agGTGATGTaatgat AACAUCAC m7b (m6b->m7b) HPTA2_346_G1054.1_105880207
hsa-miR-499b-3p agGTGATGTaatgat AACAUCAC m7b (m6b->m7b) HPTA2_346_G1054.1_105880207
hsa-miR-6083 aggtGATATAAtgat CUUAUAUC m7b Disrupted HPTA2_346_G1054.1_105880207
hsa-miR-6504-3p aggtgaTGTAATGat CAUUACAG m7a Created HPTA2_346_G1054.1_105880207

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser