SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0055918
Gene Symbol: MRPS9
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.105099705CGG>CAA COSM143605 cSCCP6 [skin][scalp][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-5p gagggAACGGAagaagc CUCCGUUU m6b Disrupted HHFCT_89452_uc002tcn.2_15_12
hsa-miR-375 gaggGAACAAAagaagc UUUGUUCG m7a Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-642b-5p gAGGGAACggaagaagc GGUUCCCU m7b Disrupted HHFCT_89452_uc002tcn.2_15_12
hsa-miR-6739-3p gaggGAACAAaagaagc AUUGUUCU m6b Created HHFCT_89452_uc002tcn.2_15_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.105099693C>T COSM4083929 TCGA-BR-4361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4643 tgatcCATGTGTgag GACACAUG m7b Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-4717-3p tgatCCATGTGTgag ACACAUGG m8a Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-4789-3p tgatccATGTGTGag CACACAUA m7a Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-4802-3p tgaTCCATGTgtgag UACAUGGA m7b Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-490-5p tgATCCATGtgtgag CCAUGGAU m7b (m6b->m7b) HHFCT_89452_uc002tcn.2_15_12
hsa-miR-377-3p tgatccaTGTGTGAg AUCACACA m7b Created HHFCT_89452_uc002tcn.2_15_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.105099684A>G COSM3564646 TCGA-D3-A2J7-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-3p acttACTACTGatcc ACAGUAGU m7b Disrupted HHFCT_89452_uc002tcn.2_15_12
hsa-miR-199b-3p acttACTACTGatcc ACAGUAGU m7b Disrupted HHFCT_89452_uc002tcn.2_15_12
hsa-miR-214-3p acttaCTGCTGatcc ACAGCAGG m6b Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-222-5p acttaCTACTGAtcc CUCAGUAG m7b Disrupted HHFCT_89452_uc002tcn.2_15_12
hsa-miR-3129-5p acttACTACTGatcc GCAGUAGU m7b Disrupted HHFCT_89452_uc002tcn.2_15_12
hsa-miR-3617-3p acttacTGCTGATcc CAUCAGCA m7b Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-4274 acttACTGCTGatcc CAGCAGUC m7a Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-4291 acttaCTGCTGAtcc UUCAGCAG m7b Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-4519 acttACTGCTGatcc CAGCAGUG m7a Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-761 acttaCTGCTGatcc GCAGCAGG m6b Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-922 acttaCTGCTGatcc GCAGCAGA m6b Created HHFCT_89452_uc002tcn.2_15_12
hsa-miR-936 acttaCTACTGatcc ACAGUAGA m6b Disrupted HHFCT_89452_uc002tcn.2_15_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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