SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0020785
Gene Symbol: MRPL23
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.1952828G>A COSM51151 Mx26 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-664a-5p agaAGCCAGactaca ACUGGCUA m6b Created HHHNE_11526_MRPL23|NM_021134|exon_CDS|-5.06439159457645|2.34387109491953
hsa-miR-6723-5p agaagcCGGACTAca AUAGUCCG m7b Disrupted HHHNE_11526_MRPL23|NM_021134|exon_CDS|-5.06439159457645|2.34387109491953
hsa-miR-6815-3p AGAAGCCAgactaca UGGCUUCU m8a Created HHHNE_11526_MRPL23|NM_021134|exon_CDS|-5.06439159457645|2.34387109491953
hsa-miR-664a-5p agaAGCCAGactaca ACUGGCUA m6b Created HHHSE_11526_MRPL23|NM_021134|exon_CDS|-5.06439159457645|2.34387109491953
hsa-miR-6723-5p agaagcCGGACTAca AUAGUCCG m7b Disrupted HHHSE_11526_MRPL23|NM_021134|exon_CDS|-5.06439159457645|2.34387109491953
hsa-miR-6815-3p AGAAGCCAgactaca UGGCUUCU m8a Created HHHSE_11526_MRPL23|NM_021134|exon_CDS|-5.06439159457645|2.34387109491953

Mutation Mutation ID Sample Name Cancer Type
chr11:g.1952209G>C COSM2151358 TCGA-06-0648 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4798-3p gcagcatCGTGAGTg AACUCACG m7b Created HHFCT_27586_cluster-3281_4_22
hsa-miR-6511a-3p gcagcaTGGTGAGtg CCUCACCA m7b Disrupted HHFCT_27586_cluster-3281_4_22
hsa-miR-6511b-3p gcagcaTGGTGAGtg CCUCACCA m7b Disrupted HHFCT_27586_cluster-3281_4_22
hsa-miR-7153-3p gcagCATGGTGagtg CACCAUGG m7a Disrupted HHFCT_27586_cluster-3281_4_22

Mutation Mutation ID Sample Name Cancer Type
chr11:g.1952188G>C COSM3979495 J90_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2278 ggCTGCTCTgcggac GAGAGCAG m7b (m6b->m7b) HHFCT_27586_cluster-3281_4_22
hsa-miR-6501-3p ggcTGCTCTGcggac CCAGAGCA m7b Created HHFCT_27586_cluster-3281_4_22
hsa-miR-6886-5p ggctgctCTGCGGac CCCGCAGG m6b Created HHFCT_27586_cluster-3281_4_22

Mutation Mutation ID Sample Name Cancer Type
chr11:g.1952178C>T COSM925836 TCGA-AP-A054-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622a-5p aCGTGCCTGtggctg CAGGCACG m8a (m7a->m8a) HHFCT_27586_cluster-3281_4_22
hsa-miR-4269 acGTGCCTGtggctg GCAGGCAC m7b (m6b->m7b) HHFCT_27586_cluster-3281_4_22
hsa-miR-449b-3p acgtgccTGTGGCTg CAGCCACA m7b Created HHFCT_27586_cluster-3281_4_22
hsa-miR-6715b-5p acGTGCCTGTggctg ACAGGCAC m8a Created HHFCT_27586_cluster-3281_4_22

Mutation Mutation ID Sample Name Cancer Type
chr11:g.1952172C>A COSM3808968 TCGA-A2-A3Y0-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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