SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0064824
Gene Symbol: MLH1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.37048955G>A COSM1422604 TCGA-AY-5543-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p agaaTGCACTatgtt CAGUGCAA m6b Created HHFKP_101784_cluster-15831_8_12
hsa-miR-130b-3p agaaTGCACTatgtt CAGUGCAA m6b Created HHFKP_101784_cluster-15831_8_12
hsa-miR-301a-3p agaaTGCACTatgtt CAGUGCAA m6b Created HHFKP_101784_cluster-15831_8_12
hsa-miR-301b-3p agaaTGCACTatgtt CAGUGCAA m6b Created HHFKP_101784_cluster-15831_8_12
hsa-miR-3666 agaaTGCACTatgtt CAGUGCAA m6b Created HHFKP_101784_cluster-15831_8_12
hsa-miR-4295 agaaTGCACTatgtt CAGUGCAA m6b Created HHFKP_101784_cluster-15831_8_12
hsa-miR-4671-3p agaaTGCACTAtgtt UUAGUGCA m7b Created HHFKP_101784_cluster-15831_8_12

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37048949G>T COSM141038 1604875 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4699-3p cAGTAAATaatgcgc AAUUUACU m7b Created HHFKP_101784_cluster-15831_8_12

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37048934G>T COSM1645314 10-428 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1323 atGTTTTGAaagcct UCAAAACU m7a (m7a->m6a) HHFKP_101783_cluster-15831_7_12
hsa-miR-548aj-3p atGTTTTTAaagcct UAAAAACU m7a (m6a->m7a) HHFKP_101783_cluster-15831_7_12
hsa-miR-548x-3p atGTTTTTAaagcct UAAAAACU m7a (m6a->m7a) HHFKP_101783_cluster-15831_7_12
hsa-miR-607 atgtTTTGAAagcct GUUCAAAU m6b Disrupted HHFKP_101783_cluster-15831_7_12

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37048924G>T COSM4420285 SNUH_G72_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p aaGAAAATGaatgtt ACAUUUUC m7b (m6b->m7b) HHFKP_101783_cluster-15831_7_12
hsa-miR-153-5p aagAAAATGAatgtt UCAUUUUU m7a Created HHFKP_101783_cluster-15831_7_12
hsa-miR-181a-5p aagaaaaTGAATGTt AACAUUCA m7b Created HHFKP_101783_cluster-15831_7_12
hsa-miR-181b-5p aagaaaaTGAATGTt AACAUUCA m7b Created HHFKP_101783_cluster-15831_7_12
hsa-miR-181c-5p aagaaaaTGAATGTt AACAUUCA m7b Created HHFKP_101783_cluster-15831_7_12
hsa-miR-181d-5p aagaaaaTGAATGTt AACAUUCA m7b Created HHFKP_101783_cluster-15831_7_12
hsa-miR-4262 aagaaaaTGAATGTt GACAUUCA m7b Created HHFKP_101783_cluster-15831_7_12
hsa-miR-5696 aagaAAATGAatgtt CUCAUUUA m6b Created HHFKP_101783_cluster-15831_7_12
hsa-miR-627-3p aAGAAAAGgaatgtt UCUUUUCU m7b Disrupted HHFKP_101783_cluster-15831_7_12
hsa-miR-664a-3p aagaaAATGAATgtt UAUUCAUU m7b Created HHFKP_101783_cluster-15831_7_12

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37048607GAG>G COSM26081 1090555 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3677-5p aGCCACTGaggtcagtg CAGUGGCC m7a Disrupted HHFKP_101782_cluster-15831_6_163
hsa-miR-4750-3p agccactGGTCAGtg CCUGACCC m6b Created HHFKP_101782_cluster-15831_6_163
hsa-miR-5693 aGCCACTGaggtcagtg GCAGUGGC m7b Disrupted HHFKP_101782_cluster-15831_6_163
hsa-miR-6790-3p agccactGAGGTCagtg CGACCUCG m6b Disrupted HHFKP_101782_cluster-15831_6_163

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37048603C>A COSM1043972 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-3p gactagCCACTGagg CCAGUGGG m6b Disrupted HHFKP_101782_cluster-15831_6_163
hsa-miR-3677-5p gactaGCCACTGagg CAGUGGCC m7a Disrupted HHFKP_101782_cluster-15831_6_163
hsa-miR-449c-3p gACTAGCAActgagg UUGCUAGU m8a (m7a->m8a) HHFKP_101782_cluster-15831_6_163
hsa-miR-5693 gactaGCCACTGagg GCAGUGGC m7b Disrupted HHFKP_101782_cluster-15831_6_163
hsa-miR-6069 gaCTAGCCactgagg GGGCUAGG m6b Disrupted HHFKP_101782_cluster-15831_6_163
hsa-miR-8086 GACTAGCAactgagg UGCUAGUC m8a Created HHFKP_101782_cluster-15831_6_163

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37048595C>T COSM1692535 TCGA-FP-A4BE-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p cATTCTTTGactagc CAAAGAAU m8a (m7a->m8a) HHFKP_101782_cluster-15831_6_163

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37048592C>A COSM172982 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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