SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0064818
Gene Symbol: MLH1
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.37001039G>T COSM583375 TCGA-44-3918-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3942-5p taccTATTGCTTtcg AAGCAAUA m8a Created HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325
hsa-miR-4703-5p taccTATTGCTttcg UAGCAAUA m7b Created HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325
hsa-miR-6826-5p taCCTATTGctttcg UCAAUAGG m7b (m6b->m7b) HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37001037A>G COSM4584282 CHEWS031 [bone][extraskeletal][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-449b-3p tctaccTGTGGCTtt CAGCCACA m7b Created HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325
hsa-miR-6831-5p TCTACCTAtggcttt UAGGUAGA m8a Disrupted HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37001021G>A COSM3993047 TCGA-GL-8500-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-892b ggatttAGCCAGTat CACUGGCU m7b Disrupted HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325
hsa-miR-664a-5p ggattTAGCCAGTat ACUGGCUA m8a Disrupted HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325
hsa-miR-193a-3p ggatttaGCCAGTat AACUGGCC m6b Disrupted HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325
hsa-miR-193b-3p ggatttaGCCAGTat AACUGGCC m6b Disrupted HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325
hsa-miR-4794 ggattTAGCCAGtat UCUGGCUA m7b Disrupted HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325

Mutation Mutation ID Sample Name Cancer Type
chr3:g.37001012G>A COSM94705 103975 [breast][NS][carcinoma][HER-positive_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-500a-5p gtcctttAAGGATTt UAAUCCUU m7b Created HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325
hsa-miR-372-5p gtccTTTGAGGattt CCUCAAAU m7a Disrupted HHKTA_36376_NM_000249|451|490|2.07686117048434|0.753514568582325

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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