SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000249
Gene Symbol: MLH1
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Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr3:g.36993604C>T COSM3774949 TCGA-G2-A3VY-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.36993599C>T COSM2985304 TCGA-EJ-A65B-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4277 ggtGAACTGCatcgc GCAGUUCU m7a Created HHFCT_109607_cluster-15831_1_20

Mutation Mutation ID Sample Name Cancer Type
chr3:g.36993593G>A COSM1422564 TCGA-A6-6138-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-197-3p gacaGTGGTGAAccg UUCACCAC m8a Disrupted HHFCT_109607_cluster-15831_1_20

Mutation Mutation ID Sample Name Cancer Type
chr3:g.36993589A>C COSM4584281 CHEWS001 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6760-3p acgaGACAGTGgtga ACACUGUC m7b Disrupted HHFCT_109607_cluster-15831_1_20

Mutation Mutation ID Sample Name Cancer Type
chr3:g.36993584G>A COSM420033 TCGA-C4-A0F1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3655 gctgGACAAGacagt GCUUGUCG m6b Created HHFCT_109607_cluster-15831_1_20

Mutation Mutation ID Sample Name Cancer Type
chr3:g.36993578C>T COSM3593041 TCGA-FS-A1Z7-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6512-3p tcggcGGCTGGAcga UUCCAGCC m7b Disrupted HHFCT_109607_cluster-15831_1_20
hsa-miR-6720-5p tcggcGGCTGGAcga UUCCAGCC m7b Disrupted HHFCT_109607_cluster-15831_1_20
hsa-miR-6746-3p tcGGCGGCTGgacga CAGCCGCC m8a Disrupted HHFCT_109607_cluster-15831_1_20
hsa-miR-6849-3p tcggcGGCTGGacga ACCAGCCU m6b Disrupted HHFCT_109607_cluster-15831_1_20

Mutation Mutation ID Sample Name Cancer Type
chr3:g.36993577G>C COSM96029 112869 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4645-5p ttcggcGCCTGGacg ACCAGGCA m6b Created HHFCT_109607_cluster-15831_1_20
hsa-miR-6512-3p ttcggcGGCTGGAcg UUCCAGCC m7b Disrupted HHFCT_109607_cluster-15831_1_20
hsa-miR-6720-5p ttcggcGGCTGGAcg UUCCAGCC m7b Disrupted HHFCT_109607_cluster-15831_1_20
hsa-miR-6746-3p ttcGGCGGCTGgacg CAGCCGCC m8a Disrupted HHFCT_109607_cluster-15831_1_20
hsa-miR-6849-3p ttcggcGGCTGGacg ACCAGCCU m6b Disrupted HHFCT_109607_cluster-15831_1_20

Mutation Mutation ID Sample Name Cancer Type
chr3:g.36993573G>A COSM269591 TCGA-AA-3715-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4427 gtTATTCAGcggctg UCUGAAUA m7b (m6b->m7b) HHFCT_109607_cluster-15831_1_20
hsa-miR-6746-3p gttattcGGCGGCTg CAGCCGCC m7b Disrupted HHFCT_109607_cluster-15831_1_20

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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