SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056524
Gene Symbol: MGAT5
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.134318737G>C COSM1494603 TCGA-CJ-4900-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1304-3p cctCAGTGAGgtgag UCUCACUG m7b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-1306-5p cctcagtGAGGTGag CCACCUCC m6b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-181b-2-3p ccTCAGTGAGgtgag CUCACUGA m8a Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-181b-3p ccTCAGTGAGgtgag CUCACUGA m8a Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-3136-5p ccTCAGTCAGgtgag CUGACUGA m8a Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-3622a-3p cctcagTCAGGTGAg UCACCUGA m8a Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-3622b-3p cctcagTCAGGTGAg UCACCUGA m8a Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4420 ccTCAGTGAggtgag GUCACUGA m7b (m7b->m6b) HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4439 ccTCAGTCAggtgag GUGACUGA m7b (m6b->m7b) HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4513 ccTCAGTCaggtgag AGACUGAC m6b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-6855-3p ccTCAGTCaggtgag AGACUGAC m6b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-6857-3p cCTCAGTCAggtgag UGACUGAG m8a (m7a->m8a) HHFCT_90115_uc002ttv.1_6_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.134318736T>G COSM3894789 CSCC-29-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-5p acCTCAGGGAggtga UCCCUGAG m8a Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-125b-5p acCTCAGGGAggtga UCCCUGAG m8a Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-1304-3p acctCAGTGAGgtga UCUCACUG m7b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-1306-5p acctcagGGAGGTGa CCACCUCC m7b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-181b-2-3p accTCAGTGAGgtga CUCACUGA m8a Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-181b-3p accTCAGTGAGgtga CUCACUGA m8a Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-345-3p accTCAGGGaggtga GCCCUGAA m6b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4319 acCTCAGGGAggtga UCCCUGAG m8a Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4324 acCTCAGGGaggtga CCCUGAGA m7a (m6a->m7a) HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4420 accTCAGTGAggtga GUCACUGA m7b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4732-3p accTCAGGGaggtga GCCCUGAC m6b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-544b aCCTCAGGgaggtga ACCUGAGG m7b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-670-5p accTCAGGGAggtga GUCCCUGA m7b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-7113-3p acctCAGGGAGGtga CCUCCCUG m8a Created HHFCT_90115_uc002ttv.1_6_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.134318733C>T COSM569943 TCGA-38-4625-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1304-3p tttacctCAGTGAGg UCUCACUG m7b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-181b-2-3p tttaccTCAGTGAGg CUCACUGA m8a Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-181b-3p tttaccTCAGTGAGg CUCACUGA m8a Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-202-3p ttTACCTCagtgagg AGAGGUAU m6b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4420 tttaccTCAGTGAgg GUCACUGA m7b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-4458 ttTACCTCagtgagg AGAGGUAG m6b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-548ag tTTACCTTagtgagg AAAGGUAA m7b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-548ai tTTACCTTagtgagg AAAGGUAA m7b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-548ba tTTACCTTagtgagg AAAGGUAA m7b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-570-5p tTTACCTTagtgagg AAAGGUAA m7b Created HHFCT_90115_uc002ttv.1_6_9
hsa-miR-7162-3p tttACCTCAGtgagg UCUGAGGU m7b Disrupted HHFCT_90115_uc002ttv.1_6_9
hsa-miR-1304-3p tttacctCAGTGAGg UCUCACUG m7b Disrupted HPRT3_14268_G18886.1_135076298
hsa-miR-181b-2-3p tttaccTCAGTGAGg CUCACUGA m8a Disrupted HPRT3_14268_G18886.1_135076298
hsa-miR-181b-3p tttaccTCAGTGAGg CUCACUGA m8a Disrupted HPRT3_14268_G18886.1_135076298
hsa-miR-202-3p ttTACCTCagtgagg AGAGGUAU m6b Disrupted HPRT3_14268_G18886.1_135076298
hsa-miR-4420 tttaccTCAGTGAgg GUCACUGA m7b Disrupted HPRT3_14268_G18886.1_135076298
hsa-miR-4458 ttTACCTCagtgagg AGAGGUAG m6b Disrupted HPRT3_14268_G18886.1_135076298
hsa-miR-548ag tTTACCTTagtgagg AAAGGUAA m7b Created HPRT3_14268_G18886.1_135076298
hsa-miR-548ai tTTACCTTagtgagg AAAGGUAA m7b Created HPRT3_14268_G18886.1_135076298
hsa-miR-548ba tTTACCTTagtgagg AAAGGUAA m7b Created HPRT3_14268_G18886.1_135076298
hsa-miR-570-5p tTTACCTTagtgagg AAAGGUAA m7b Created HPRT3_14268_G18886.1_135076298
hsa-miR-7162-3p tttACCTCAGtgagg UCUGAGGU m7b Disrupted HPRT3_14268_G18886.1_135076298
hsa-miR-1304-3p tttacctCAGTGAGg UCUCACUG m7b Disrupted HPSEF_12330_G14816.1_135076298
hsa-miR-181b-2-3p tttaccTCAGTGAGg CUCACUGA m8a Disrupted HPSEF_12330_G14816.1_135076298
hsa-miR-181b-3p tttaccTCAGTGAGg CUCACUGA m8a Disrupted HPSEF_12330_G14816.1_135076298
hsa-miR-202-3p ttTACCTCagtgagg AGAGGUAU m6b Disrupted HPSEF_12330_G14816.1_135076298
hsa-miR-4420 tttaccTCAGTGAgg GUCACUGA m7b Disrupted HPSEF_12330_G14816.1_135076298
hsa-miR-4458 ttTACCTCagtgagg AGAGGUAG m6b Disrupted HPSEF_12330_G14816.1_135076298
hsa-miR-548ag tTTACCTTagtgagg AAAGGUAA m7b Created HPSEF_12330_G14816.1_135076298
hsa-miR-548ai tTTACCTTagtgagg AAAGGUAA m7b Created HPSEF_12330_G14816.1_135076298
hsa-miR-548ba tTTACCTTagtgagg AAAGGUAA m7b Created HPSEF_12330_G14816.1_135076298
hsa-miR-570-5p tTTACCTTagtgagg AAAGGUAA m7b Created HPSEF_12330_G14816.1_135076298
hsa-miR-7162-3p tttACCTCAGtgagg UCUGAGGU m7b Disrupted HPSEF_12330_G14816.1_135076298

Mutation Mutation ID Sample Name Cancer Type
chr2:g.134318702A>T COSM3566641 TCGA-FW-A5DY-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7151-5p ggagtgGATGGATCc GAUCCAUC m8a Disrupted HHFCT_90115_uc002ttv.1_6_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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