SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001085481
Gene Symbol: MAP1LC3B2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.116576035C>T COSM3456622 TCGA-EE-A2GC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1290 ccAAAATCCcggtga UGGAUUUU m7b (m7b->m6b) HHFKP_37930_cluster-5199_1_17
hsa-miR-181d-3p ccaaaatCCCGGTGa CCACCGGG m7b Disrupted HHFKP_37930_cluster-5199_1_17
hsa-miR-4655-5p ccaaaatCCCGGTGa CACCGGGG m7a Disrupted HHFKP_37930_cluster-5199_1_17

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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