SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003690
Gene Symbol: MAD2L1BP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.43640086A>C COSM1242488 ESO-717 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3158-3p gccaacAAGCCCTgg AAGGGCUU m7b Disrupted HHKTA_32675_NM_001003690|653|692|2.24993293469137|1.01747176612492
hsa-miR-1268b gccaaCACGCCCtgg CGGGCGUG m7b Created HHKTA_32675_NM_001003690|653|692|2.24993293469137|1.01747176612492
hsa-miR-1268a gccaaCACGCCCtgg CGGGCGUG m7b Created HHKTA_32675_NM_001003690|653|692|2.24993293469137|1.01747176612492

Mutation Mutation ID Sample Name Cancer Type
chr6:g.43640065G>A COSM4429017 398 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-767-3p ctgaggTGAGCAGca UCUGCUCA m7b Disrupted HHKTA_32675_NM_001003690|653|692|2.24993293469137|1.01747176612492
hsa-miR-1178-3p ctgagGTGAGCAgca UUGCUCAC m7b Disrupted HHKTA_32675_NM_001003690|653|692|2.24993293469137|1.01747176612492
hsa-miR-4777-3p cTGAGGTAagcagca AUACCUCA m7b Created HHKTA_32675_NM_001003690|653|692|2.24993293469137|1.01747176612492

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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