SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0053942
Gene Symbol: LTBP1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.33397150G>A COSM1407882 TCGA-F4-6570-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-9-3p tAGCTTTAaggagtt AUAAAGCU m7b Created HHFKP_81086_cluster-12829_30_21
hsa-miR-372-5p tagcTTTGAGGagtt CCUCAAAU m7a Disrupted HHFKP_81086_cluster-12829_30_21
hsa-miR-330-3p taGCTTTGaggagtt GCAAAGCA m6b Disrupted HHFKP_81086_cluster-12829_30_21

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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