SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0053915
Gene Symbol: LTBP1
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.33262772C>T COSM3581270 TCGA-DA-A3F8-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p gtcaaccCCAGCTGt UCAGCUGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-193b-5p gtcAACCCCagctgt CGGGGUUU m6b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-3170 gtcAACCCCAGctgt CUGGGGUU m8a Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-377-5p gtCAACCTCagctgt AGAGGUUG m7b (m6b->m7b) HHFKP_81073_cluster-12829_17_10
hsa-miR-4731-5p gtcaaCCCCAGCtgt UGCUGGGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-563 GTCAACCTcagctgt AGGUUGAC m8a Created HHFKP_81073_cluster-12829_17_10
hsa-miR-6086 gtCAACCTCagctgt GGAGGUUG m7b (m6b->m7b) HHFKP_81073_cluster-12829_17_10
hsa-miR-655-5p gtcAACCTCagctgt AGAGGUUA m6b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-6855-5p gtcAACCCCAgctgt UUGGGGUU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7155-5p gtcaACCCCAGctgt UCUGGGGU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7160-5p gtcaaCCTCAGCtgt UGCUGAGG m7b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-7162-3p gtcaACCTCAGctgt UCUGAGGU m7b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-1207-3p gtcaaccCCAGCTGt UCAGCUGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-193b-5p gtcAACCCCagctgt CGGGGUUU m6b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-3170 gtcAACCCCAGctgt CUGGGGUU m8a Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-377-5p gtCAACCTCagctgt AGAGGUUG m7b (m6b->m7b) HHFKP_81073_cluster-12829_17_10
hsa-miR-4731-5p gtcaaCCCCAGCtgt UGCUGGGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-563 GTCAACCTcagctgt AGGUUGAC m8a Created HHFKP_81073_cluster-12829_17_10
hsa-miR-6086 gtCAACCTCagctgt GGAGGUUG m7b (m6b->m7b) HHFKP_81073_cluster-12829_17_10
hsa-miR-655-5p gtcAACCTCagctgt AGAGGUUA m6b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-6855-5p gtcAACCCCAgctgt UUGGGGUU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7155-5p gtcaACCCCAGctgt UCUGGGGU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7160-5p gtcaaCCTCAGCtgt UGCUGAGG m7b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-7162-3p gtcaACCTCAGctgt UCUGAGGU m7b Created HHFKP_81073_cluster-12829_17_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33262772C>A COSM4093945 TCGA-CD-A4MI-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p gtcaaccCCAGCTGt UCAGCUGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-1273g-5p gtCAACCACagctgt GGUGGUUG m7b (m6b->m7b) HHFKP_81073_cluster-12829_17_10
hsa-miR-193b-5p gtcAACCCCagctgt CGGGGUUU m6b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-203a-5p gtcAACCACagctgt AGUGGUUC m6b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-3170 gtcAACCCCAGctgt CUGGGGUU m8a Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-380-5p GTCAACCAcagctgt UGGUUGAC m8a Created HHFKP_81073_cluster-12829_17_10
hsa-miR-4731-5p gtcaaCCCCAGCtgt UGCUGGGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-6855-5p gtcAACCCCAgctgt UUGGGGUU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7155-5p gtcaACCCCAGctgt UCUGGGGU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-1207-3p gtcaaccCCAGCTGt UCAGCUGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-1273g-5p gtCAACCACagctgt GGUGGUUG m7b (m6b->m7b) HHFKP_81073_cluster-12829_17_10
hsa-miR-193b-5p gtcAACCCCagctgt CGGGGUUU m6b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-203a-5p gtcAACCACagctgt AGUGGUUC m6b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-3170 gtcAACCCCAGctgt CUGGGGUU m8a Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-380-5p GTCAACCAcagctgt UGGUUGAC m8a Created HHFKP_81073_cluster-12829_17_10
hsa-miR-4731-5p gtcaaCCCCAGCtgt UGCUGGGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-6855-5p gtcAACCCCAgctgt UUGGGGUU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7155-5p gtcaACCCCAGctgt UCUGGGGU m7b Disrupted HHFKP_81073_cluster-12829_17_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33262771C>A COSM574839 TCGA-05-4427-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-5p ggtcaaCACCAGCTg AGCUGGUG m8a Created HHFKP_81073_cluster-12829_17_10
hsa-miR-193b-5p ggtcAACCCCagctg CGGGGUUU m6b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-3170 ggtcAACCCCAGctg CUGGGGUU m8a Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-380-5p gGTCAACCccagctg UGGUUGAC m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-4694-5p ggtcAACACCagctg AGGUGUUA m6b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-4731-5p ggtcaaCCCCAGCtg UGCUGGGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-563 gGTCAACCccagctg AGGUUGAC m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-6855-5p ggtcAACCCCAgctg UUGGGGUU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7155-5p ggtcaACCCCAGctg UCUGGGGU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7978 ggtcaACACCAGctg UCUGGUGU m7b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-138-5p ggtcaaCACCAGCTg AGCUGGUG m8a Created HHFKP_81073_cluster-12829_17_10
hsa-miR-193b-5p ggtcAACCCCagctg CGGGGUUU m6b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-3170 ggtcAACCCCAGctg CUGGGGUU m8a Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-380-5p gGTCAACCccagctg UGGUUGAC m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-4694-5p ggtcAACACCagctg AGGUGUUA m6b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-4731-5p ggtcaaCCCCAGCtg UGCUGGGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-563 gGTCAACCccagctg AGGUUGAC m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-6855-5p ggtcAACCCCAgctg UUGGGGUU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7155-5p ggtcaACCCCAGctg UCUGGGGU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7978 ggtcaACACCAGctg UCUGGUGU m7b Created HHFKP_81073_cluster-12829_17_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33262770C>T COSM4093942 TCGA-CG-5726-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-193b-5p tggtcAACCCCagct CGGGGUUU m6b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-3170 tggtcAACCCCAGct CUGGGGUU m8a Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-380-5p tgGTCAACCccagct UGGUUGAC m7b (m7b->m6b) HHFKP_81073_cluster-12829_17_10
hsa-miR-4731-5p tggtcaaCCCCAGCt UGCUGGGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-5089-5p tggtcAATCCCAgct GUGGGAUU m7b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-563 tgGTCAACCccagct AGGUUGAC m7b (m7b->m6b) HHFKP_81073_cluster-12829_17_10
hsa-miR-619-5p tggtcaATCCCAGCt GCUGGGAU m8a Created HHFKP_81073_cluster-12829_17_10
hsa-miR-6506-5p tggtcaATCCCAGct ACUGGGAU m7b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-6855-5p tggtcAACCCCAgct UUGGGGUU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7155-5p tggtcaACCCCAGct UCUGGGGU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-193b-5p tggtcAACCCCagct CGGGGUUU m6b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-3170 tggtcAACCCCAGct CUGGGGUU m8a Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-380-5p tgGTCAACCccagct UGGUUGAC m7b (m7b->m6b) HHFKP_81073_cluster-12829_17_10
hsa-miR-4731-5p tggtcaaCCCCAGCt UGCUGGGG m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-5089-5p tggtcAATCCCAgct GUGGGAUU m7b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-563 tgGTCAACCccagct AGGUUGAC m7b (m7b->m6b) HHFKP_81073_cluster-12829_17_10
hsa-miR-619-5p tggtcaATCCCAGCt GCUGGGAU m8a Created HHFKP_81073_cluster-12829_17_10
hsa-miR-6506-5p tggtcaATCCCAGct ACUGGGAU m7b Created HHFKP_81073_cluster-12829_17_10
hsa-miR-6855-5p tggtcAACCCCAgct UUGGGGUU m7b Disrupted HHFKP_81073_cluster-12829_17_10
hsa-miR-7155-5p tggtcaACCCCAGct UCUGGGGU m7b Disrupted HHFKP_81073_cluster-12829_17_10

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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