SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | hsa_circ_0056643 |
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Gene Symbol: | LRP1B |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.140928128G>A | COSN5782335 | HX22T | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2681-3p | ttCCATGATgtaatg | UAUCAUGG | m7b | (m6b->m7b) | HPRO6_46988_G55699.1_141685696 |
hsa-miR-499a-3p | ttccaTGATGTaatg | AACAUCAC | m6b | Created | HPRO6_46988_G55699.1_141685696 |
hsa-miR-499b-3p | ttccaTGATGTaatg | AACAUCAC | m6b | Created | HPRO6_46988_G55699.1_141685696 |
hsa-miR-7153-3p | ttCCATGGTGtaatg | CACCAUGG | m8a | Disrupted | HPRO6_46988_G55699.1_141685696 |
hsa-miR-2681-3p | ttCCATGATgtaatg | UAUCAUGG | m7b | (m6b->m7b) | HPRO8_8878_G11732.1_141685696 |
hsa-miR-499a-3p | ttccaTGATGTaatg | AACAUCAC | m6b | Created | HPRO8_8878_G11732.1_141685696 |
hsa-miR-499b-3p | ttccaTGATGTaatg | AACAUCAC | m6b | Created | HPRO8_8878_G11732.1_141685696 |
hsa-miR-7153-3p | ttCCATGGTGtaatg | CACCAUGG | m8a | Disrupted | HPRO8_8878_G11732.1_141685696 |
hsa-miR-2681-3p | ttCCATGATgtaatg | UAUCAUGG | m7b | (m6b->m7b) | HPTA3_11429_G18047.1_141685696 |
hsa-miR-499a-3p | ttccaTGATGTaatg | AACAUCAC | m6b | Created | HPTA3_11429_G18047.1_141685696 |
hsa-miR-499b-3p | ttccaTGATGTaatg | AACAUCAC | m6b | Created | HPTA3_11429_G18047.1_141685696 |
hsa-miR-7153-3p | ttCCATGGTGtaatg | CACCAUGG | m8a | Disrupted | HPTA3_11429_G18047.1_141685696 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.140903040G>A | COSM3567231 | TCGA-GN-A262-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4760-3p | aattgTGAATTattg | AAAUUCAU | m6b | Created | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-5092 | aattGTGGATTattg | AAUCCACG | m7a | Disrupted | HHFKP_77840_cluster-13926_8_7 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.140903033G>T | COSM1399756 | TCGA-F4-6460-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-187-5p | gattaTTGTAGCaat | GGCUACAA | m7b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-221-3p | gattatTGTAGCaat | AGCUACAU | m6b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-222-3p | gattatTGTAGCaat | AGCUACAU | m6b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-338-5p | gatTATTGTagcaat | AACAAUAU | m6b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-5089-3p | gattattGTAGCAat | AUGCUACU | m6b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-548v | gattatTGTAGCaat | AGCUACAG | m6b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-5692a | gATTATTTtagcaat | CAAAUAAU | m7b | Created | HHFKP_77840_cluster-13926_8_7 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.140903019A>C | COSM1399755 | TCGA-AA-3492-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1183 | tcatCTACAGTGcag | CACUGUAG | m8a | Created | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-376a-2-5p | tcATCTACagtgcag | GGUAGAUU | m6b | Created | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-4325 | tcatctaAAGTGCAg | UUGCACUU | m7b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-8061 | tcATCTAAagtgcag | CUUAGAUU | m6b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.140903014C>T | COSM4085206 | TCGA-HU-A4GT-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-187-5p | taaagTGTAGCCaag | GGCUACAA | m7a | Created | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-4325 | taAAGTGCAgccaag | UUGCACUU | m7b | (m7b->m6b) | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-4793-3p | taaAGTGCAGccaag | UCUGCACU | m7b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-604 | taaagtGCAGCCaag | AGGCUGCG | m6b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-647 | taaagtGCAGCCAag | GUGGCUGC | m7b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-6762-3p | taaagtGCAGCCAag | UGGCUGCU | m7a | Disrupted | HHFKP_77840_cluster-13926_8_7 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.140903007G>T | COSM1007057 | TCGA-BS-A0TC-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1-5p | cagccAAGTATGTga | ACAUACUU | m8a | Disrupted | HHFKP_77840_cluster-13926_8_7 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.140903001G>T | COSM1685098 | PC-9BRc1 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1178-3p | agtatGTGAGCAgca | UUGCUCAC | m7b | Disrupted | HHFKP_77840_cluster-13926_8_7 |
hsa-miR-767-3p | agtatgTGAGCAGca | UCUGCUCA | m7b | Disrupted | HHFKP_77840_cluster-13926_8_7 |