SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0004362
Gene Symbol: LPAR1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.110941926C>T COSM3925932 TCGA-EB-A3Y7-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-3p cagacTTTTTTGctg ACAAAAAA m7b Created HPKTA_62637_G67795.1_113704202
hsa-miR-548p cagacttTTTTGCTg UAGCAAAA m7b Created HPKTA_62637_G67795.1_113704202
hsa-miR-3613-3p cagacTTTTTTGctg ACAAAAAA m7b Created HPRO6_78051_G93621.1_113704202
hsa-miR-548p cagacttTTTTGCTg UAGCAAAA m7b Created HPRO6_78051_G93621.1_113704202
hsa-miR-3613-3p cagacTTTTTTGctg ACAAAAAA m7b Created HPTK1_30154_G36182.1_113704202
hsa-miR-548p cagacttTTTTGCTg UAGCAAAA m7b Created HPTK1_30154_G36182.1_113704202

Mutation Mutation ID Sample Name Cancer Type
chr9:g.110941907T>A COSM4570702 CSCC-18-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3171 ggccTACATCTatct AGAUGUAU m7a Created HPKTA_62637_G67795.1_113704202
hsa-miR-548ao-5p ggccTACTTCTatct AGAAGUAA m7a Disrupted HPKTA_62637_G67795.1_113704202
hsa-miR-548ax ggccTACTTCTatct AGAAGUAA m7a Disrupted HPKTA_62637_G67795.1_113704202
hsa-miR-576-3p ggcctACATCTatct AAGAUGUG m6b Created HPKTA_62637_G67795.1_113704202
hsa-miR-3171 ggccTACATCTatct AGAUGUAU m7a Created HPRO6_78051_G93621.1_113704202
hsa-miR-548ao-5p ggccTACTTCTatct AGAAGUAA m7a Disrupted HPRO6_78051_G93621.1_113704202
hsa-miR-548ax ggccTACTTCTatct AGAAGUAA m7a Disrupted HPRO6_78051_G93621.1_113704202
hsa-miR-576-3p ggcctACATCTatct AAGAUGUG m6b Created HPRO6_78051_G93621.1_113704202
hsa-miR-3171 ggccTACATCTatct AGAUGUAU m7a Created HPTK1_30154_G36182.1_113704202
hsa-miR-548ao-5p ggccTACTTCTatct AGAAGUAA m7a Disrupted HPTK1_30154_G36182.1_113704202
hsa-miR-548ax ggccTACTTCTatct AGAAGUAA m7a Disrupted HPTK1_30154_G36182.1_113704202
hsa-miR-576-3p ggcctACATCTatct AAGAUGUG m6b Created HPTK1_30154_G36182.1_113704202

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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