SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0021087
Gene Symbol: LMO1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.8230131A>G COSN1138849 HCC86T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6840-3p ataCCTGGGaagtca GCCCAGGA m6b Created HHFCT_24159_cluster-4073_3_9
hsa-miR-6764-5p ataCCTGGGAagtca UCCCAGGG m7a Created HHFCT_24159_cluster-4073_3_9
hsa-miR-6505-3p atacctgAGAAGTCa UGACUUCU m7b Disrupted HHFCT_24159_cluster-4073_3_9
hsa-miR-617 atacctgGGAAGTCa AGACUUCC m7b Created HHFCT_24159_cluster-4073_3_9
hsa-miR-1266-5p ataCCTGAGaagtca CCUCAGGG m6b Disrupted HHFCT_24159_cluster-4073_3_9
hsa-miR-4726-3p atACCTGGGaagtca ACCCAGGU m7b (m6b->m7b) HHFCT_24159_cluster-4073_3_9
hsa-miR-4518 ataCCTGAGaagtca GCUCAGGG m6b Disrupted HHFCT_24159_cluster-4073_3_9
hsa-miR-3664-3p ataCCTGAGAagtca UCUCAGGA m7a Disrupted HHFCT_24159_cluster-4073_3_9
hsa-miR-1915-3p ataCCTGGGaagtca CCCCAGGG m6b Created HHFCT_24159_cluster-4073_3_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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