SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_002315 |
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Gene Symbol: | LMO1 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr11:g.8254240G>A | COSN5710163 | HX26T | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1301-5p | ccggcgTAGAGCagt | CGCUCUAG | m6b | Created | HHFCT_24165_cluster-4073_9_9 |
hsa-miR-6502-5p | ccggcgTAGAGCagt | AGCUCUAG | m6b | Created | HHFCT_24165_cluster-4073_9_9 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr11:g.8232504C>T | COSN7287754 | 8067246 | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3649 | tccAGGTCCCactct | AGGGACCU | m7b | Disrupted | HHFKP_22878_cluster-4073_4_8 |
hsa-miR-3661 | tCCAGGTCccactct | UGACCUGG | m7b | Disrupted | HHFKP_22878_cluster-4073_4_8 |
hsa-miR-4481 | tccaggtCCCACTCt | GGAGUGGG | m7b | Disrupted | HHFKP_22878_cluster-4073_4_8 |
hsa-miR-4648 | tccagGTCCCACtct | UGUGGGAC | m7b | Disrupted | HHFKP_22878_cluster-4073_4_8 |
hsa-miR-4745-5p | tccaggtCCCACTCt | UGAGUGGG | m7b | Disrupted | HHFKP_22878_cluster-4073_4_8 |
hsa-miR-490-3p | tCCAGGTTccactct | CAACCUGG | m7b | Created | HHFKP_22878_cluster-4073_4_8 |
hsa-miR-492 | tcCAGGTCCcactct | AGGACCUG | m7b | (m7b->m6b) | HHFKP_22878_cluster-4073_4_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr11:g.8224646C>T | COSM458359 | TCGA-DS-A0VM-01 | [cervix][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4487 | ggCAGCTCaatggca | AGAGCUGG | m6b | Disrupted | HHFCT_24157_cluster-4073_1_8 |
hsa-miR-558 | gGCAGCTCAatggca | UGAGCUGC | m8a | (m8a->m7a) | HHFCT_24157_cluster-4073_1_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr11:g.8224640C>T | COSM4874016 | TCGA-AP-A051-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-18a-5p | tcaatgGCACCTTtg | UAAGGUGC | m7b | Disrupted | HHFCT_24157_cluster-4073_1_8 |
hsa-miR-18b-5p | tcaatgGCACCTTtg | UAAGGUGC | m7b | Disrupted | HHFCT_24157_cluster-4073_1_8 |
hsa-miR-4735-3p | tcaatgGCACCTTTg | AAAGGUGC | m8a | Disrupted | HHFCT_24157_cluster-4073_1_8 |
hsa-miR-548m | tcaatggTACCTTTg | CAAAGGUA | m7b | Created | HHFCT_24157_cluster-4073_1_8 |
hsa-miR-18a-5p | tcaatgGCACCTTtg | UAAGGUGC | m7b | Disrupted | HHFCT_24157_cluster-4073_1_8 |
hsa-miR-18b-5p | tcaatgGCACCTTtg | UAAGGUGC | m7b | Disrupted | HHFCT_24157_cluster-4073_1_8 |
hsa-miR-4735-3p | tcaatgGCACCTTTg | AAAGGUGC | m8a | Disrupted | HHFCT_24157_cluster-4073_1_8 |
hsa-miR-548m | tcaatggTACCTTTg | CAAAGGUA | m7b | Created | HHFCT_24157_cluster-4073_1_8 |