SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001113546
Gene Symbol: LIMA1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.50234204C>A COSN1080644 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1295b-5p ggttgtTCTGGGTGg CACCCAGA m8a Disrupted HPKMB_1997_G2250.2_50627974
hsa-miR-1912 ggttgtTCTGGGTgg UACCCAGA m7b Disrupted HPKMB_1997_G2250.2_50627974
hsa-miR-500b-3p ggttgttCTGGGTGg GCACCCAG m7b Disrupted HPKMB_1997_G2250.2_50627974
hsa-miR-589-3p ggtTGTTCTGggtgg UCAGAACA m7b Disrupted HPKMB_1997_G2250.2_50627974

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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