SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002299
Gene Symbol: LCT
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.135794663A>G COSM716750 TCGA-85-6560-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273f cactgCCATCTCttc GGAGAUGG m7b Disrupted HPSD3_5953_G7951.1_136552242
hsa-miR-449a CACTGCCAtctcttc UGGCAGUG m8a Disrupted HPSD3_5953_G7951.1_136552242
hsa-miR-34a-5p CACTGCCAtctcttc UGGCAGUG m8a Disrupted HPSD3_5953_G7951.1_136552242

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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