SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0061097
Gene Symbol: LAMA5
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.62346547G>A COSM1681821 TK10 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4536-5p ttCTACCACtctccc UGUGGUAG m7b (m6b->m7b) HHFKP_88265_uc002ycq.1_26_21
hsa-miR-4693-3p ttctacCACTCTCcc UGAGAGUG m7b Created HHFKP_88265_uc002ycq.1_26_21
hsa-miR-5192 ttctaccACTCTCCc AGGAGAGU m7b Created HHFKP_88265_uc002ycq.1_26_21

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62346542C>T COSM4991401 S08-41239-TP [skin][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273h-5p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30b-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30c-1-3p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30c-2-3p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3147 ccgctctCCCAACCa GGUUGGGC m7a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689a-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689b-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689c ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-4425 ccgctcTCCCAACca UGUUGGGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6077 ccgCTCTTCCaacca GGGAAGAG m7b Created HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6731-5p ccgCTCTCCCAacca UGGGAGAG m8a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6779-5p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6788-5p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6878-5p ccgcTCTCCCaacca AGGGAGAA m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-7-5p ccgcTCTTCCAacca UGGAAGAC m7a Created HHFKP_88265_uc002ycq.1_26_21
hsa-miR-8085 ccgCTCTCCCAacca UGGGAGAG m8a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-887-5p ccgctCTCCCAAcca CUUGGGAG m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-92a-1-5p ccgctctCCCAACCa AGGUUGGG m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-1273h-5p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30b-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30c-1-3p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30c-2-3p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3147 ccgctctCCCAACCa GGUUGGGC m7a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689a-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689b-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689c ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-4425 ccgctcTCCCAACca UGUUGGGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6077 ccgCTCTTCCaacca GGGAAGAG m7b Created HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6731-5p ccgCTCTCCCAacca UGGGAGAG m8a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6779-5p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6788-5p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6878-5p ccgcTCTCCCaacca AGGGAGAA m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-7-5p ccgcTCTTCCAacca UGGAAGAC m7a Created HHFKP_88265_uc002ycq.1_26_21
hsa-miR-8085 ccgCTCTCCCAacca UGGGAGAG m8a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-887-5p ccgctCTCCCAAcca CUUGGGAG m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-92a-1-5p ccgctctCCCAACCa AGGUUGGG m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-1273h-5p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30b-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30c-1-3p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-30c-2-3p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3147 ccgctctCCCAACCa GGUUGGGC m7a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689a-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689b-3p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-3689c ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-4425 ccgctcTCCCAACca UGUUGGGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6077 ccgCTCTTCCaacca GGGAAGAG m7b Created HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6731-5p ccgCTCTCCCAacca UGGGAGAG m8a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6779-5p ccgctCTCCCAacca CUGGGAGG m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6788-5p ccgcTCTCCCAacca CUGGGAGA m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-6878-5p ccgcTCTCCCaacca AGGGAGAA m6b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-7-5p ccgcTCTTCCAacca UGGAAGAC m7a Created HHFKP_88265_uc002ycq.1_26_21
hsa-miR-8085 ccgCTCTCCCAacca UGGGAGAG m8a Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-887-5p ccgctCTCCCAAcca CUUGGGAG m7b Disrupted HHFKP_88265_uc002ycq.1_26_21
hsa-miR-92a-1-5p ccgctctCCCAACCa AGGUUGGG m7b Disrupted HHFKP_88265_uc002ycq.1_26_21

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62338593C>T COSM3785432 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3648 tgcagCGCGGCaggg AGCCGCGG m6b Disrupted HHFKP_88260_uc002ycq.1_21_29
hsa-miR-4722-3p tgcagcgTGGCAGGg ACCUGCCA m7b Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6727-3p tgcagcgTGGCAGGg UCCUGCCA m7b Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6869-3p tgcaGCGCGGCaggg CGCCGCGC m7b Disrupted HHFKP_88260_uc002ycq.1_21_29

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62338589A>T COSM578278 TCGA-64-5774-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6752-3p gcgcGGCAGGGAccc UCCCUGCC m8a Disrupted HHFKP_88260_uc002ycq.1_21_29
hsa-miR-7977 gcgcgGCTGGGAccc UUCCCAGC m7b Created HHFKP_88260_uc002ycq.1_21_29

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62338583C>A COSM3389877 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146b-3p cagggacACAGGGCa UGCCCUGU m7b Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-3657 caGGGACACAgggca UGUGUCCC m8a Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-4281 caGGGACCCagggca GGGUCCCG m7a (m7a->m6a) HHFKP_88260_uc002ycq.1_21_29
hsa-miR-4292 cagggaCCCAGGGca CCCCUGGG m7b Disrupted HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6742-3p cagggACCCAGGgca ACCUGGGU m7b Disrupted HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6791-5p cagggaCCCAGGGca CCCCUGGG m7b Disrupted HHFKP_88260_uc002ycq.1_21_29

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62338567C>G COSM3963749 699_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1180-3p cgcctGCCGGAAgga UUUCCGGC m7b Disrupted HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6734-3p cgcctgcGGGAAGGa CCCUUCCC m7b Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6886-5p cgCCTGCGGGaagga CCCGCAGG m8a Created HHFKP_88260_uc002ycq.1_21_29

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62338566G>T COSM1028877 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1180-3p gcctGCCGGAAggac UUUCCGGC m7b Disrupted HHFKP_88260_uc002ycq.1_21_29
hsa-miR-2682-5p gcCTGCCTGaaggac CAGGCAGU m7a (m6a->m7a) HHFKP_88260_uc002ycq.1_21_29
hsa-miR-3667-3p gcctgccGGAAGGac ACCUUCCU m6b Disrupted HHFKP_88260_uc002ycq.1_21_29
hsa-miR-4269 gccTGCCTGaaggac GCAGGCAC m6b Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-4514 gcCTGCCTGaaggac ACAGGCAG m7b (m6b->m7b) HHFKP_88260_uc002ycq.1_21_29
hsa-miR-4692 gcCTGCCTGAaggac UCAGGCAG m8a Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-4742-5p gccTGCCTGAaggac UCAGGCAA m7a Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6511a-5p gcCTGCCTGaaggac CAGGCAGA m7a (m6a->m7a) HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6715b-5p gccTGCCTGaaggac ACAGGCAC m6b Created HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6734-3p gcctgccGGAAGGac CCCUUCCC m6b Disrupted HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6808-5p gCCTGCCTGaaggac CAGGCAGG m8a (m7a->m8a) HHFKP_88260_uc002ycq.1_21_29
hsa-miR-6893-5p gCCTGCCTGaaggac CAGGCAGG m8a (m7a->m8a) HHFKP_88260_uc002ycq.1_21_29
hsa-miR-940 gCCTGCCTgaaggac AAGGCAGG m7b Created HHFKP_88260_uc002ycq.1_21_29

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62338014T>C COSM4756242 pfg127T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1178-3p gccaagGTGAGCAga UUGCUCAC m7b Disrupted HHFKP_88258_uc002ycq.1_19_417
hsa-miR-212-5p GCCAAGGTgagcaga ACCUUGGC m8a Disrupted HHFKP_88258_uc002ycq.1_19_417
hsa-miR-3200-3p gcCAAGGTGagcaga CACCUUGC m7a (m7a->m6a) HHFKP_88258_uc002ycq.1_19_417
hsa-miR-6813-3p gCCAAGGTgagcaga AACCUUGG m7b Disrupted HHFKP_88258_uc002ycq.1_19_417
hsa-miR-6880-3p gccAAGGCGagcaga CCGCCUUC m6b Created HHFKP_88258_uc002ycq.1_19_417
hsa-miR-767-3p gccaaggTGAGCAGa UCUGCUCA m7b Disrupted HHFKP_88258_uc002ycq.1_19_417

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser