SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0061088
Gene Symbol: LAMA5
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.62334776A>G COSN15608047 C0002T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-5p cGCCCTCACcctcgc GUGAGGGC m8a (m8a->m7a) HHFCT_95064_uc002ycq.1_9_26
hsa-miR-4649-5p cgccCTCGCCCtcgc UGGGCGAG m7b Created HHFCT_95064_uc002ycq.1_9_26
hsa-miR-4710 cgcCCTCACCCtcgc GGGUGAGG m8a Disrupted HHFCT_95064_uc002ycq.1_9_26
hsa-miR-6729-5p cgccCTCGCCCtcgc UGGGCGAG m7b Created HHFCT_95064_uc002ycq.1_9_26
hsa-miR-6804-5p cgccctCACCCTCgc UGAGGGUG m7b Disrupted HHFCT_95064_uc002ycq.1_9_26
hsa-miR-1226-5p cGCCCTCACcctcgc GUGAGGGC m8a (m8a->m7a) HHFCT_95064_uc002ycq.1_9_26
hsa-miR-4649-5p cgccCTCGCCCtcgc UGGGCGAG m7b Created HHFCT_95064_uc002ycq.1_9_26
hsa-miR-4710 cgcCCTCACCCtcgc GGGUGAGG m8a Disrupted HHFCT_95064_uc002ycq.1_9_26
hsa-miR-6729-5p cgccCTCGCCCtcgc UGGGCGAG m7b Created HHFCT_95064_uc002ycq.1_9_26
hsa-miR-6804-5p cgccctCACCCTCgc UGAGGGUG m7b Disrupted HHFCT_95064_uc002ycq.1_9_26

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62328304G>T COSM4607795 2293776 [adrenal_gland][adrenal_gland][adrenal_cortical_carcinoma][functioning]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 tgtaaCTTCTCaggg AGAGAAGA m6b Created HHKTA_47313_NM_005560|4651|4690|1.47110999575974|0.247819857327501
hsa-miR-4251 tgtaacTTCTCAGGg CCUGAGAA m8a Created HHKTA_47313_NM_005560|4651|4690|1.47110999575974|0.247819857327501
hsa-miR-4324 tgtaactTCTCAGGg CCCUGAGA m7b Created HHKTA_47313_NM_005560|4651|4690|1.47110999575974|0.247819857327501
hsa-miR-4468 tgtaaCTGCTCaggg AGAGCAGA m6b Disrupted HHKTA_47313_NM_005560|4651|4690|1.47110999575974|0.247819857327501
hsa-miR-4670-3p tgTAACTTCtcaggg UGAAGUUA m7b (m6b->m7b) HHKTA_47313_NM_005560|4651|4690|1.47110999575974|0.247819857327501
hsa-miR-935 tGTAACTGctcaggg CCAGUUAC m7b Disrupted HHKTA_47313_NM_005560|4651|4690|1.47110999575974|0.247819857327501

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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