SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0061083
Gene Symbol: LAMA5
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.62321118C>A COSN5766546 HCC172T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1296-5p gtgctGGCCCTAcct UUAGGGCC m7b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-4512 gtgctGGCCCTacct CAGGGCCU m6b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-4640-5p gtgCTGGCCCtacct UGGGCCAG m7b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-4726-5p gtgCTGGCCCTacct AGGGCCAG m8a Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-6895-5p gtgcTGGCCCTacct CAGGGCCA m7b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-7160-3p gtgctGGCCCTacct CAGGGCCC m6b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-1296-5p gtgctGGCCCTAcct UUAGGGCC m7b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-4512 gtgctGGCCCTacct CAGGGCCU m6b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-4640-5p gtgCTGGCCCtacct UGGGCCAG m7b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-4726-5p gtgCTGGCCCTacct AGGGCCAG m8a Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-6895-5p gtgcTGGCCCTacct CAGGGCCA m7b Disrupted HHFKP_88246_uc002ycq.1_7_442
hsa-miR-7160-3p gtgctGGCCCTacct CAGGGCCC m6b Disrupted HHFKP_88246_uc002ycq.1_7_442

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62316986A>G COSM4929759 TCGA-G3-A6UC-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2276-5p caccCAGAGGGCcat GCCCUCUG m8a Disrupted HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-326 caCCCAGAGGgccat CCUCUGGG m8a Disrupted HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-328-3p cacccagAGGGCCAt CUGGCCCU m7b Disrupted HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-330-5p caCCCAGAGggccat UCUCUGGG m7b (m7b->m6b) HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-331-3p cacCCAGGGGgccat GCCCCUGG m7b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-4292 caCCCAGGGGgccat CCCCUGGG m8a Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-4313 cacccAGGGGGCcat AGCCCCCU m7b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-6742-3p cACCCAGGgggccat ACCUGGGU m7b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-6775-3p cacccagAGGGCCat AGGCCCUG m6b Disrupted HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-6791-5p caCCCAGGGGgccat CCCCUGGG m8a Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-874-5p cacccagGGGGCCat CGGCCCCA m6b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-6791-5p caCCCAGGGGgccat CCCCUGGG m8a Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-6742-3p cACCCAGGgggccat ACCUGGGU m7b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-6775-3p cacccagAGGGCCat AGGCCCUG m6b Disrupted HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-874-5p cacccagGGGGCCat CGGCCCCA m6b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-2276-5p caccCAGAGGGCcat GCCCUCUG m8a Disrupted HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-326 caCCCAGAGGgccat CCUCUGGG m8a Disrupted HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-328-3p cacccagAGGGCCAt CUGGCCCU m7b Disrupted HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-330-5p caCCCAGAGggccat UCUCUGGG m7b (m7b->m6b) HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-331-3p cacCCAGGGGgccat GCCCCUGG m7b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-4292 caCCCAGGGGgccat CCCCUGGG m8a Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-4313 cacccAGGGGGCcat AGCCCCCU m7b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62316956C>T COSM3693618 TCGA-AM-5821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1301-3p ctacAGCTGCAtcct UUGCAGCU m7b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-5047 ctacAGCTGCAtcct UUGCAGCU m7b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-1301-3p ctacAGCTGCAtcct UUGCAGCU m7b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-5047 ctacAGCTGCAtcct UUGCAGCU m7b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62316955G>A COSM3693617 TCGA-AM-5820-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1265 tacagccACATCCTg CAGGAUGU m7b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-4474-3p tacAGCCACAtcctg UUGUGGCU m7b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-4764-5p tacagcCACATCCtg UGGAUGUG m7b Created HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-647 taCAGCCACatcctg GUGGCUGC m7a (m6a->m7a) HHHNE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-1265 tacagccACATCCTg CAGGAUGU m7b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-4474-3p tacAGCCACAtcctg UUGUGGCU m7b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-4764-5p tacagcCACATCCtg UGGAUGUG m7b Created HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877
hsa-miR-647 taCAGCCACatcctg GUGGCUGC m7a (m6a->m7a) HHHSE_9685_LAMA5|NM_005560|exon_CDS|-4.06379075489973|1.07369504932877

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62314329C>A COSM1318823 TCGA-AB-2832-03 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-629-3p tgGGGAGAAgttcgc GUUCUCCC m7b (m6b->m7b) HHFKP_88245_uc002ycq.1_6_43
hsa-miR-6867-3p tgGGGAGAagttcgc CUCUCCCU m6b Created HHFKP_88245_uc002ycq.1_6_43

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62314324C>T COSM4697285 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548av-3p aGCAGTTTgcagctg AAAACUGC m7b Created HHFKP_88245_uc002ycq.1_6_43

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62314323G>A COSM1242452 ESO-717 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203b-3p gCAGTTCAcagctgt UUGAACUG m7b Created HHFKP_88245_uc002ycq.1_6_43

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62314212T>C COSN8611240 1428_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1914-3p accACCCCTCacctc GGAGGGGU m7b Created HHFCT_95061_uc002ycq.1_5_18
hsa-miR-3179 accaCCCTTCacctc AGAAGGGG m6b Disrupted HHFCT_95061_uc002ycq.1_5_18
hsa-miR-4710 accaccCCTCACCtc GGGUGAGG m7b Created HHFCT_95061_uc002ycq.1_5_18
hsa-miR-5194 accACCCCTCAcctc UGAGGGGU m8a Created HHFCT_95061_uc002ycq.1_5_18
hsa-miR-608 aCCACCCCTcacctc AGGGGUGG m8a (m7a->m8a) HHFCT_95061_uc002ycq.1_5_18
hsa-miR-6734-5p accaCCCCTCAcctc UUGAGGGG m7b Created HHFCT_95061_uc002ycq.1_5_18
hsa-miR-6738-5p accACCCCTCacctc CGAGGGGU m7b Created HHFCT_95061_uc002ycq.1_5_18
hsa-miR-6782-5p acCACCCCTcacctc UAGGGGUG m7b (m6b->m7b) HHFCT_95061_uc002ycq.1_5_18
hsa-miR-6864-5p accaCCCTTCAcctc UUGAAGGG m7b Disrupted HHFCT_95061_uc002ycq.1_5_18
hsa-miR-7515 accaCCCTTCacctc AGAAGGGA m6b Disrupted HHFCT_95061_uc002ycq.1_5_18

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62314198C>T COSN5268805 SNUH_G79_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3138 ctccaTGTCCACtcg UGUGGACA m7b Created HHFCT_95061_uc002ycq.1_5_18
hsa-miR-3622b-5p ctCCATGCCcactcg AGGCAUGG m7b (m7b->m6b) HHFCT_95061_uc002ycq.1_5_18
hsa-miR-3945 ctccATGCCCactcg AGGGCAUA m6b Disrupted HHFCT_95061_uc002ycq.1_5_18
hsa-miR-4253 ctcCATGCCCactcg AGGGCAUG m7b Disrupted HHFCT_95061_uc002ycq.1_5_18
hsa-miR-4481 ctccatgCCCACTCg GGAGUGGG m7b Disrupted HHFCT_95061_uc002ycq.1_5_18
hsa-miR-4745-5p ctccatgCCCACTCg UGAGUGGG m7b Disrupted HHFCT_95061_uc002ycq.1_5_18
hsa-miR-4802-3p cTCCATGTccactcg UACAUGGA m7b Created HHFCT_95061_uc002ycq.1_5_18
hsa-miR-6862-5p ctcCATGCCCactcg CGGGCAUG m7b Disrupted HHFCT_95061_uc002ycq.1_5_18

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62313677A>T COSM1213021 587332 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1277-3p gtctTCTACGTcggg UACGUAGA m7b Disrupted HHFCT_95060_uc002ycq.1_3_77
hsa-miR-3185 gtCTTCTTCgtcggg AGAAGAAG m7b (m6b->m7b) HHFCT_95060_uc002ycq.1_3_77

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62313666T>C COSM3693616 TCGA-F4-6856-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-342-5p cgggggGCACCCCag AGGGGUGC m7b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-4313 cgGGGGGCaccccag AGCCCCCU m6b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-4640-3p cgGGGGGTaccccag CACCCCCU m6b Disrupted HHFCT_95060_uc002ycq.1_3_77
hsa-miR-4651 cggggggCACCCCag CGGGGUGG m6b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-4664-5p cgggggGCACCCCAg UGGGGUGC m8a Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-608 cggggggCACCCCag AGGGGUGG m6b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-6737-5p cggggggCACCCCAg UUGGGGUG m7b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-6747-5p cggggggCACCCCag AGGGGUGU m6b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-6798-3p cgGGGGGTAccccag CUACCCCC m7b (m7b->m6b) HHFCT_95060_uc002ycq.1_3_77
hsa-miR-6812-5p cggggggCACCCCAg AUGGGGUG m7b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-6819-5p cggggggCACCCCAg UUGGGGUG m7b Created HHFCT_95060_uc002ycq.1_3_77

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62313666GT>T COSM2930401 pfg181T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4640-3p tcgGGGGGTaccccag CACCCCCU m6b Disrupted HHFCT_95060_uc002ycq.1_3_77
hsa-miR-6798-3p tcgGGGGGTAccccag CUACCCCC m7b Disrupted HHFCT_95060_uc002ycq.1_3_77
hsa-miR-6881-5p tcgggggTACCCCAg UGGGGUAA m7a Created HHFCT_95060_uc002ycq.1_3_77

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62313649G>A COSM4697284 T3512 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1304-3p ccttcaCAGTGAGcc UCUCACUG m7b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-3611 cCTTCACAgtgagcc UUGUGAAG m7b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-4318 ccttCACAGTGagcc CACUGUGG m7a Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-6760-3p ccttcACAGTGagcc ACACUGUC m6b Created HHFCT_95060_uc002ycq.1_3_77
hsa-miR-892a ccttCACAGTGagcc CACUGUGU m7a Created HHFCT_95060_uc002ycq.1_3_77

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62313440C>T COSM4511398 CSCC-16-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3153 ttcgCTTTCCCggct GGGGAAAG m7b Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-4271 ttcgCTTCCCCggct GGGGGAAG m7b Disrupted HHFKP_88244_uc002ycq.1_5_40
hsa-miR-4725-3p ttcgCTTCCCCggct UGGGGAAG m7b Disrupted HHFKP_88244_uc002ycq.1_5_40
hsa-miR-6733-5p ttcgCTTTCCCggct UGGGAAAG m7b Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-6739-5p ttcgCTTTCCCggct UGGGAAAG m7b Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-6780b-5p ttcgCTTCCCCggct UGGGGAAG m7b Disrupted HHFKP_88244_uc002ycq.1_5_40

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62313437C>T COSM4697283 T1760 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4271 gCTTCCCCggctacc GGGGGAAG m7b Disrupted HHFKP_88244_uc002ycq.1_5_40
hsa-miR-4676-5p gcttccCTGGCTacc GAGCCAGU m6b Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-4725-3p gCTTCCCCggctacc UGGGGAAG m7b Disrupted HHFKP_88244_uc002ycq.1_5_40
hsa-miR-4755-3p gcttcCCTGGCTacc AGCCAGGC m7a Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-575 gcttccCTGGCTacc GAGCCAGU m6b Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-6780b-5p gCTTCCCCggctacc UGGGGAAG m7b Disrupted HHFKP_88244_uc002ycq.1_5_40
hsa-miR-6858-3p gcttccCTGGCTacc CAGCCAGC m6b Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-7113-5p gctTCCCTGGctacc UCCAGGGA m7b Created HHFKP_88244_uc002ycq.1_5_40

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62313429G>T COSM1256280 ESO-135 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4690-3p ggctaccTGGGCTGc GCAGCCCA m7b Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-4726-3p ggctACCTGGGctgc ACCCAGGU m7b Created HHFKP_88244_uc002ycq.1_5_40
hsa-miR-5685 ggctaccTGGGCTGc ACAGCCCA m7b Created HHFKP_88244_uc002ycq.1_5_40

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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