SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0061072
Gene Symbol: LAMA5
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.62311219G>A COSM1213020 587332 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-371a-5p caGTTTGAGggttcc ACUCAAAC m7b (m6b->m7b) HHFKP_88241_uc002ycq.1_2_70

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62311216G>A COSM3911733 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6750-5p tttggggGTTCCCTg CAGGGAAC m7b Disrupted HHFKP_88241_uc002ycq.1_2_70
hsa-miR-6822-5p tttggggGTTCCCTg CAGGGAAC m7b Disrupted HHFKP_88241_uc002ycq.1_2_70

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62311213C>T COSM4019733 SS6003109 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4496 ggggGTTTCCTgtcc GAGGAAAC m7b Created HHFKP_88241_uc002ycq.1_2_70
hsa-miR-6750-5p ggggGTTCCCTGtcc CAGGGAAC m8a Disrupted HHFKP_88241_uc002ycq.1_2_70
hsa-miR-6771-3p gGGGGTTTcctgtcc CAAACCCC m7b Created HHFKP_88241_uc002ycq.1_2_70
hsa-miR-6822-5p ggggGTTCCCTGtcc CAGGGAAC m8a Disrupted HHFKP_88241_uc002ycq.1_2_70

Mutation Mutation ID Sample Name Cancer Type
chr20:g.62311205A>T COSM4697277 T3152 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-134-5p cctgtcCAGTCACct UGUGACUG m7b Disrupted HHFKP_88241_uc002ycq.1_2_70
hsa-miR-3118 cctgtcCAGTCACct UGUGACUG m7b Disrupted HHFKP_88241_uc002ycq.1_2_70
hsa-miR-3654 cctGTCCAGTCacct GACUGGAC m8a Disrupted HHFKP_88241_uc002ycq.1_2_70
hsa-miR-4436a ccTGTCCTGtcacct GCAGGACA m7b (m6b->m7b) HHFKP_88241_uc002ycq.1_2_70
hsa-miR-4520-3p cCTGTCCAgtcacct UUGGACAG m7b Disrupted HHFKP_88241_uc002ycq.1_2_70
hsa-miR-4638-3p ccTGTCCAGtcacct CCUGGACA m7b (m7b->m6b) HHFKP_88241_uc002ycq.1_2_70
hsa-miR-4700-3p cctGTCCTGTcacct CACAGGAC m7b Created HHFKP_88241_uc002ycq.1_2_70
hsa-miR-5000-3p ccTGTCCTGtcacct UCAGGACA m7b (m6b->m7b) HHFKP_88241_uc002ycq.1_2_70
hsa-miR-542-3p cctgtcCTGTCACct UGUGACAG m7b Created HHFKP_88241_uc002ycq.1_2_70

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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