SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_005560
Gene Symbol: LAMA5
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.62367029T>G COSM4972199 2328683 [thyroid][NS][carcinoma][Hurthle_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4706 gcgcggcTCCCCGCg AGCGGGGA m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4749-5p gcgcggcTCCCCGCg UGCGGGGA m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6777-5p gcgcggCTCCCCGcg ACGGGGAG m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6827-5p gcgcGGCTCCCcgcg UGGGAGCC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6869-3p GCGCGGCGccccgcg CGCCGCGC m8a Created HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6889-5p gcgcggCTCCCCGcg UCGGGGAG m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-744-5p gcgcggcGCCCCGCg UGCGGGGC m7b Created HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-939-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-1343-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4706 gcgcggcTCCCCGCg AGCGGGGA m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4749-5p gcgcggcTCCCCGCg UGCGGGGA m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6777-5p gcgcggCTCCCCGcg ACGGGGAG m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6827-5p gcgcGGCTCCCcgcg UGGGAGCC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6869-3p GCGCGGCGccccgcg CGCCGCGC m8a Created HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6889-5p gcgcggCTCCCCGcg UCGGGGAG m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-744-5p gcgcggcGCCCCGCg UGCGGGGC m7b Created HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-939-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-1343-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4706 gcgcggcTCCCCGCg AGCGGGGA m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4749-5p gcgcggcTCCCCGCg UGCGGGGA m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6777-5p gcgcggCTCCCCGcg ACGGGGAG m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6827-5p gcgcGGCTCCCcgcg UGGGAGCC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6869-3p GCGCGGCGccccgcg CGCCGCGC m8a Created HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6889-5p gcgcggCTCCCCGcg UCGGGGAG m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-744-5p gcgcggcGCCCCGCg UGCGGGGC m7b Created HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-939-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-1343-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4706 gcgcggcTCCCCGCg AGCGGGGA m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4749-5p gcgcggcTCCCCGCg UGCGGGGA m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6777-5p gcgcggCTCCCCGcg ACGGGGAG m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6827-5p gcgcGGCTCCCcgcg UGGGAGCC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6869-3p GCGCGGCGccccgcg CGCCGCGC m8a Created HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6889-5p gcgcggCTCCCCGcg UCGGGGAG m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-744-5p gcgcggcGCCCCGCg UGCGGGGC m7b Created HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-939-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-1343-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4706 gcgcggcTCCCCGCg AGCGGGGA m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4749-5p gcgcggcTCCCCGCg UGCGGGGA m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6777-5p gcgcggCTCCCCGcg ACGGGGAG m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6827-5p gcgcGGCTCCCcgcg UGGGAGCC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6869-3p GCGCGGCGccccgcg CGCCGCGC m8a Created HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6889-5p gcgcggCTCCCCGcg UCGGGGAG m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-744-5p gcgcggcGCCCCGCg UGCGGGGC m7b Created HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-939-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHNA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-1343-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4706 gcgcggcTCCCCGCg AGCGGGGA m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-4749-5p gcgcggcTCCCCGCg UGCGGGGA m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6777-5p gcgcggCTCCCCGcg ACGGGGAG m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6827-5p gcgcGGCTCCCcgcg UGGGAGCC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6869-3p GCGCGGCGccccgcg CGCCGCGC m8a Created HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-6889-5p gcgcggCTCCCCGcg UCGGGGAG m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-744-5p gcgcggcGCCCCGCg UGCGGGGC m7b Created HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536
hsa-miR-939-5p gcgcgGCTCCCCgcg UGGGGAGC m7b Disrupted HHHSA_14858_LAMA5|NM_005560|exon_CDS|-3.91756085558146|0.645868807592536

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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