SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0046767
Gene Symbol: LAMA1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.6999629A>G COSM3756203 P13 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-151a-5p gCTCCTCGAgctatt UCGAGGAG m8a (m7a->m8a) HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-151b gCTCCTCGAgctatt UCGAGGAG m8a (m7a->m8a) HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-3150b-3p gCTCCTCAagctatt UGAGGAGA m7a Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-4453 gctcctCAAGCTatt GAGCUUGG m6b Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-4538 gctcctCAAGCTatt GAGCUUGG m6b Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-4689 gCTCCTCAAgctatt UUGAGGAG m8a (m8a->m7a) HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-4784 gCTCCTCAagctatt UGAGGAGA m7a Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-611 gcTCCTCGagctatt GCGAGGAC m6b Created HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-7705 gctcctcGAGCTATt AAUAGCUC m7b Created HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-1224-5p gcTCCTCAagctatt GUGAGGAC m6b Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-151a-5p gCTCCTCGAgctatt UCGAGGAG m8a (m7a->m8a) HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-151b gCTCCTCGAgctatt UCGAGGAG m8a (m7a->m8a) HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-3150b-3p gCTCCTCAagctatt UGAGGAGA m7a Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-4453 gctcctCAAGCTatt GAGCUUGG m6b Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-4538 gctcctCAAGCTatt GAGCUUGG m6b Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-4689 gCTCCTCAAgctatt UUGAGGAG m8a (m8a->m7a) HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-4784 gCTCCTCAagctatt UGAGGAGA m7a Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-611 gcTCCTCGagctatt GCGAGGAC m6b Created HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-7705 gctcctcGAGCTATt AAUAGCUC m7b Created HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6999612C>A COSM4697198 T3091 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-5p gggaaCCCTCAaaca GUGAGGGC m6b Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-218-1-3p gGGAACCATcaaaca AUGGUUCC m8a (m7a->m8a) HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-218-2-3p ggGAACCATcaaaca CAUGGUUC m7b (m6b->m7b) HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-23a-5p gGGAACCCtcaaaca GGGGUUCC m7b Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-23b-5p gGGAACCCtcaaaca UGGGUUCC m7b Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-296-3p gggAACCCTCaaaca GAGGGUUG m7a Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-6734-5p gggaaCCCTCAAaca UUGAGGGG m7a Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-6804-5p gggaACCCTCAaaca UGAGGGUG m7a Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-6834-5p gggaaCCCTCAaaca GUGAGGGA m6b Disrupted HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-758-5p gggAACCATCaaaca GAUGGUUG m7a Created HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-8069 gggAACCATCaaaca GGAUGGUU m7b Created HHHNE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-1226-5p gggaaCCCTCAaaca GUGAGGGC m6b Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-218-1-3p gGGAACCATcaaaca AUGGUUCC m8a (m7a->m8a) HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-218-2-3p ggGAACCATcaaaca CAUGGUUC m7b (m6b->m7b) HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-23a-5p gGGAACCCtcaaaca GGGGUUCC m7b Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-23b-5p gGGAACCCtcaaaca UGGGUUCC m7b Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-296-3p gggAACCCTCaaaca GAGGGUUG m7a Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-6734-5p gggaaCCCTCAAaca UUGAGGGG m7a Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-6804-5p gggaACCCTCAaaca UGAGGGUG m7a Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-6834-5p gggaaCCCTCAaaca GUGAGGGA m6b Disrupted HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-758-5p gggAACCATCaaaca GAUGGUUG m7a Created HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417
hsa-miR-8069 gggAACCATCaaaca GGAUGGUU m7b Created HHHSE_9683_LAMA1|NM_005559|exon_CDS|-6.30078958306212|1.15292800176417

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6983154A>C COSM1680208 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p ctgATTGCAGaatcg CUGCAAUG m7a Created HHFKP_65821_cluster-10922_6_40
hsa-miR-2276-3p ctgaTTGCAGAatcg UCUGCAAG m7a Created HHFKP_65821_cluster-10922_6_40
hsa-miR-4705 cTGATTGAagaatcg UCAAUCAC m7a Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-4772-3p ctgaTTGCAGaatcg CCUGCAAC m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-544a ctgatTGCAGAATcg AUUCUGCA m8a Created HHFKP_65821_cluster-10922_6_40
hsa-miR-676-5p ctgaTTGAAGAatcg UCUUCAAC m7a Disrupted HHFKP_65821_cluster-10922_6_40

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6983148C>T COSM124058 587222 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-5p gaagaatTGGAGGAa GUCCUCCA m7b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-519d-5p gaagaaTTGGAGGaa CCUCCAAA m7a Created HHFKP_65821_cluster-10922_6_40
hsa-miR-6792-3p gaagaatTGGAGGAa CUCCUCCA m7b Created HHFKP_65821_cluster-10922_6_40

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6983140C>A COSM3959368 J85_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3187-3p ggaggaaATGGCCAg UUGGCCAU m7b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-4435 ggaggaaCTGGCCAg AUGGCCAG m7b Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-4529-5p ggaggaaATGGCCag AGGCCAUC m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-584-3p ggaGGAACTGgccag UCAGUUCC m7b Disrupted HHFKP_65821_cluster-10922_6_40

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6983137G>T COSM474026 TCGA-BP-5170-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3176 ggaactGGCCAGaga ACUGGCCU m6b Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-3190-5p ggaacTGGCCAGAga UCUGGCCA m8a Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-378a-3p ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-378b ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-378c ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-378d ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-378e ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-378f ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-378h ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-378i ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-422a ggaactGTCCAGaga ACUGGACU m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-4435 ggaaCTGGCCAgaga AUGGCCAG m7b Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-4520-3p ggaaCTGTCCAgaga UUGGACAG m7b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-4638-3p ggaacTGTCCAGaga CCUGGACA m7b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-518c-5p ggaactgTCCAGAGa UCUCUGGA m7b Created HHFKP_65821_cluster-10922_6_40

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6983125C>A COSM474025 TCGA-B8-5551-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1266-3p agatgctAACAGGac CCCUGUUC m6b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-1914-5p agatgctCACAGGac CCCUGUGC m6b Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-4677-3p agatgCTCACAGgac UCUGUGAG m7b Disrupted HHFKP_65821_cluster-10922_6_40

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6983120G>A COSM3527437 TCGA-EE-A2MS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148b-5p ctcaCAGAACTgtga AAGUUCUG m7b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-1910-5p ctcacAGGACTGtga CCAGUCCU m7b Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-1914-5p ctCACAGGactgtga CCCUGUGC m6b Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-4277 ctcacAGAACTGtga GCAGUUCU m7b Created HHFKP_65821_cluster-10922_6_40
hsa-miR-4677-3p CTCACAGAactgtga UCUGUGAG m8a Created HHFKP_65821_cluster-10922_6_40
hsa-miR-4679 cTCACAGAactgtga UCUGUGAU m7a Created HHFKP_65821_cluster-10922_6_40
hsa-miR-6838-3p ctcaCAGGACTgtga AAGUCCUG m7b Disrupted HHFKP_65821_cluster-10922_6_40
hsa-miR-6874-3p ctcaCAGAACTGtga CAGUUCUG m8a Created HHFKP_65821_cluster-10922_6_40

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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