SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0046762
Gene Symbol: LAMA1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.6950821C>A COSM282344 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-769-5p caaAGGTCTCtcacc UGAGACCU m7b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-6759-3p cAAAGGTCtctcacc UGACCUUU m7b Disrupted HHFKP_65818_cluster-10922_3_235

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6950801G>C COSM1256239 ESO-1133 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4420 ctgcTCAGTGAtggc GUCACUGA m7b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-5094 ctgctCACTGATggc AAUCAGUG m7b Created HHFKP_65818_cluster-10922_3_235
hsa-miR-5190 ctgcTCACTGatggc CCAGUGAC m6b Created HHFKP_65818_cluster-10922_3_235
hsa-miR-6884-3p ctgctcaGTGATGGc CCCAUCAC m7b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-4276 ctgcTCACTGAtggc CUCAGUGA m7b Created HHFKP_65818_cluster-10922_3_235
hsa-miR-181b-2-3p ctgcTCAGTGAtggc CUCACUGA m7b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-181b-3p ctgcTCAGTGAtggc CUCACUGA m7b Disrupted HHFKP_65818_cluster-10922_3_235

Mutation Mutation ID Sample Name Cancer Type
chr18:g.6950798A>T COSM1324508 TCGA-24-1843-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4659a-5p ctcagtgATGGCAag CUGCCAUG m6b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-4420 cTCAGTGAtggcaag GUCACUGA m7b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-200a-3p ctCAGTGTTggcaag UAACACUG m7b (m6b->m7b) HHFKP_65818_cluster-10922_3_235
hsa-miR-192-3p ctcagtgTTGGCAag CUGCCAAU m6b Created HHFKP_65818_cluster-10922_3_235
hsa-miR-181b-3p cTCAGTGAtggcaag CUCACUGA m7b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-141-3p ctCAGTGTTggcaag UAACACUG m7b (m6b->m7b) HHFKP_65818_cluster-10922_3_235
hsa-miR-181b-2-3p cTCAGTGAtggcaag CUCACUGA m7b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-4776-3p ctcagtgATGGCAAg CUUGCCAU m7b Disrupted HHFKP_65818_cluster-10922_3_235
hsa-miR-5189-3p ctcagtGTTGGCAag UGCCAACC m7a Created HHFKP_65818_cluster-10922_3_235
hsa-miR-6884-3p ctcaGTGATGGcaag CCCAUCAC m7b Disrupted HHFKP_65818_cluster-10922_3_235

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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