SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042603
Gene Symbol: KDM5A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.285504C>A COSM1285704 TARGET-30-PARDYU [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-126-5p cttcctTAATAATGa CAUUAUUA m8a Created HPSD3_2439_G3279.1_394661
hsa-miR-4477a cttcCTTAATAatga CUAUUAAG m7b Created HPSD3_2439_G3279.1_394661
hsa-miR-4477b ctTCCTTAATaatga AUUAAGGA m8a Created HPSD3_2439_G3279.1_394661
hsa-miR-1252-5p cTTCCTTCataatga AGAAGGAA m7b Disrupted HPSD3_2439_G3279.1_394661
hsa-miR-126-5p cttcctTAATAATGa CAUUAUUA m8a Created HPSD3_2439_G3279.1_394661
hsa-miR-4477a cttcCTTAATAatga CUAUUAAG m7b Created HPSD3_2439_G3279.1_394661
hsa-miR-4477b ctTCCTTAATaatga AUUAAGGA m8a Created HPSD3_2439_G3279.1_394661
hsa-miR-1252-5p cTTCCTTCataatga AGAAGGAA m7b Disrupted HPSD3_2439_G3279.1_394661

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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