SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077397
Gene Symbol: IRF2BP2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.234607170A>T COSM1492035 TCGA-B4-5836-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-766-3p ttGCTGGAGatgtga ACUCCAGC m7b (m7b->m6b) HPRT3_3023_G3939.1_234742922
hsa-miR-1226-3p ttGCTGGTGAtgtga UCACCAGC m8a Created HPRT3_3023_G3939.1_234742922
hsa-miR-499b-3p ttgctgGTGATGTga AACAUCAC m7b Created HPRT3_3023_G3939.1_234742922
hsa-miR-499a-3p ttgctgGTGATGTga AACAUCAC m7b Created HPRT3_3023_G3939.1_234742922
hsa-miR-4733-3p ttgCTGGTGatgtga CCACCAGG m6b Created HPRT3_3023_G3939.1_234742922
hsa-miR-3925-3p ttgCTGGAGatgtga ACUCCAGU m6b Disrupted HPRT3_3023_G3939.1_234742922

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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