SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001101669
Gene Symbol: INPP4B
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.142563098C>T COSN9904844 C0012T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-577 cagtgTTTATCTttc UAGAUAAA m7b Created HHFCT_116599_cluster-17822_32_7

Mutation Mutation ID Sample Name Cancer Type
chr4:g.142055088C>G COSN1995706 RK046_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-5p ataGTGACTTaacat CAAGUCAC m7b Disrupted HHFCT_116569_cluster-17822_2_8
hsa-miR-3680-5p atAGTGAGTtaacat GACUCACU m7b (m6b->m7b) HHFCT_116569_cluster-17822_2_8
hsa-miR-4798-3p ataGTGAGTTaacat AACUCACG m7a Created HHFCT_116569_cluster-17822_2_8
hsa-miR-6750-3p ataGTGAGTTaacat GAACUCAC m7b Created HHFCT_116569_cluster-17822_2_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.142035451T>A COSN4609130
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4662a-3p gTATCTTTatctagt AAAGAUAG m7a Disrupted HHFCT_116568_cluster-17822_1_8
hsa-miR-577 gtatcTTTATCTAgt UAGAUAAA m8a Disrupted HHFCT_116568_cluster-17822_1_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.142028861C>T COSM3414472 SS6003324 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p AAGTATGTtttcaac ACAUACUU m8a Created HHFKP_108084_cluster-17822_1_8
hsa-miR-4422 aagtATGCTTTcaac AAAAGCAU m7b Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-570-3p aagtaTGTTTTCaac CGAAAACA m7b Created HHFKP_108084_cluster-17822_1_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.142028839G>T COSM4923461 TCGA-CC-A7IH-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-3p aGCTGATTGctttcc CAAUCAGC m8a (m7a->m8a) HHFKP_108084_cluster-17822_1_8
hsa-miR-34a-3p aGCTGATTGctttcc CAAUCAGC m8a (m7a->m8a) HHFKP_108084_cluster-17822_1_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.142028831C>A COSM389860 LUAD_E00703 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2110 gctTTCCCCAAgtac UUGGGGAA m8a Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-3150a-3p gcttTCCCCAagtac CUGGGGAG m6b Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-3153 gCTTTCCCCaagtac GGGGAAAG m8a (m8a->m7a) HHFKP_108084_cluster-17822_1_8
hsa-miR-3190-3p gctTTCCACAagtac UGUGGAAG m7a Created HHFKP_108084_cluster-17822_1_8
hsa-miR-3978 gCTTTCCACaagtac GUGGAAAG m8a (m7a->m8a) HHFKP_108084_cluster-17822_1_8
hsa-miR-4271 gctTTCCCCaagtac GGGGGAAG m6b Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-450a-2-3p gcttTCCCCAAgtac AUUGGGGA m7b Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-4725-3p gctTTCCCCAagtac UGGGGAAG m7a Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-635 gctttcCCCAAGTac ACUUGGGC m7a Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-6733-5p gCTTTCCCcaagtac UGGGAAAG m7b Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-6739-5p gCTTTCCCcaagtac UGGGAAAG m7b Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-6763-5p gcttTCCCCAagtac CUGGGGAG m6b Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-6774-5p gctttcCCCAAGTac ACUUGGGC m7a Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-6780b-5p gctTTCCCCAagtac UGGGGAAG m7a Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-6810-5p gcttTCCCCAagtac AUGGGGAC m6b Disrupted HHFKP_108084_cluster-17822_1_8
hsa-miR-6833-5p gctTTCCACAagtac GUGUGGAA m7b Created HHFKP_108084_cluster-17822_1_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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