SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040694
Gene Symbol: INCENP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.62150070C>G COSM1509257 TCGA-69-7980-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7d-5p gcttgTACCTCatat AGAGGUAG m6b Disrupted HPSLC_3306_G3899.1_61917536
hsa-miR-187-5p gcTTGTAGCtcatat GGCUACAA m7b (m6b->m7b) HPSLC_3306_G3899.1_61917536
hsa-miR-202-3p gcttgTACCTCatat AGAGGUAU m6b Disrupted HPSLC_3306_G3899.1_61917536
hsa-miR-4458 gcttgTACCTCatat AGAGGUAG m6b Disrupted HPSLC_3306_G3899.1_61917536
hsa-miR-556-5p gcttgtAGCTCATat GAUGAGCU m7b Created HPSLC_3306_G3899.1_61917536

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62150056G>T COSM1727302 273T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4434 ttttgcaTTCTCCag AGGAGAAG m6b Created HPSLC_3306_G3899.1_61917536
hsa-miR-4516 ttttgcaTTCTCCag GGGAGAAG m6b Created HPSLC_3306_G3899.1_61917536
hsa-miR-4531 ttttgcaTTCTCCAg AUGGAGAA m7b Created HPSLC_3306_G3899.1_61917536
hsa-miR-5703 ttttgcaTTCTCCag AGGAGAAG m6b Created HPSLC_3306_G3899.1_61917536
hsa-miR-873-3p ttttgCAGTCTCCag GGAGACUG m8a Disrupted HPSLC_3306_G3899.1_61917536
hsa-miR-4434 ttttgcaTTCTCCag AGGAGAAG m6b Created HPSLC_3306_G3899.1_61917536
hsa-miR-4516 ttttgcaTTCTCCag GGGAGAAG m6b Created HPSLC_3306_G3899.1_61917536
hsa-miR-4531 ttttgcaTTCTCCAg AUGGAGAA m7b Created HPSLC_3306_G3899.1_61917536
hsa-miR-5703 ttttgcaTTCTCCag AGGAGAAG m6b Created HPSLC_3306_G3899.1_61917536
hsa-miR-873-3p ttttgCAGTCTCCag GGAGACUG m8a Disrupted HPSLC_3306_G3899.1_61917536

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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