SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001206567
Gene Symbol: IFI16

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.159045442C>A COSM2156408 TCGA-19-2631-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-599 tcaACACAAagcagc GUUGUGUC m6b Created HPSLB_283_G344.1_159015235
hsa-miR-5010-3p tcaACACAAAgcagc UUUUGUGU m7b Created HPSLB_283_G344.1_159015235
hsa-miR-1251-3p tcaacaCAAAGCagc CGCUUUGC m6b Created HPSLB_283_G344.1_159015235
hsa-miR-599 tcaACACAAagcagc GUUGUGUC m6b Created HPSLB_283_G344.1_159015235
hsa-miR-5010-3p tcaACACAAAgcagc UUUUGUGU m7b Created HPSLB_283_G344.1_159015235
hsa-miR-1251-3p tcaacaCAAAGCagc CGCUUUGC m6b Created HPSLB_283_G344.1_159015235

Mutation Mutation ID Sample Name Cancer Type
chr1:g.159010078T>C COSN8320779 ASHPC_0013_Pa_P [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7111-5p atttatCTCCCCCct UGGGGGAG m7b Disrupted HPSLB_281_G342.1_158979882
hsa-miR-5010-5p atttATCCCCCccct AGGGGGAU m7b Created HPSLB_281_G342.1_158979882
hsa-miR-4723-5p atttatCTCCCCCct UGGGGGAG m7b Disrupted HPSLB_281_G342.1_158979882
hsa-miR-4525 atttATCCCCCCcct GGGGGGAU m8a Created HPSLB_281_G342.1_158979882
hsa-miR-5698 atttatCTCCCCCct UGGGGGAG m7b Disrupted HPSLB_281_G342.1_158979882
hsa-miR-3175 atttaTCTCCCCcct CGGGGAGA m7b Disrupted HPSLB_281_G342.1_158979882
hsa-miR-6887-5p atttatcTCCCCCCt UGGGGGGA m7b Disrupted HPSLB_281_G342.1_158979882
hsa-miR-6870-5p atttatCTCCCCCct UGGGGGAG m7b Disrupted HPSLB_281_G342.1_158979882
hsa-miR-6795-5p atttatcTCCCCCCt UGGGGGGA m7b Disrupted HPSLB_281_G342.1_158979882
hsa-miR-577 aTTTATCTcccccct UAGAUAAA m7b Disrupted HPSLB_281_G342.1_158979882

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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