SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000864
Gene Symbol: HTR1D
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.23193152C>A COSM3485501 TCGA-EB-A5UN-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8061 tAATCTAAactgtgt CUUAGAUU m7b Created HHFKP_1121_uc001bgn.1_1_16
hsa-miR-4760-5p tAATCTAAActgtgt UUUAGAUU m8a (m7a->m8a) HHFKP_1121_uc001bgn.1_1_16
hsa-miR-4280 taatCTACACTgtgt GAGUGUAG m7b Disrupted HHFKP_1121_uc001bgn.1_1_16
hsa-miR-128-3p taatctaCACTGTGt UCACAGUG m7b Disrupted HHFKP_1121_uc001bgn.1_1_16
hsa-miR-376a-5p tAATCTACactgtgt GUAGAUUC m7a Disrupted HHFKP_1121_uc001bgn.1_1_16
hsa-miR-376a-2-5p tAATCTACactgtgt GGUAGAUU m7b Disrupted HHFKP_1121_uc001bgn.1_1_16
hsa-miR-3681-3p taatctaCACTGTGt ACACAGUG m7b Disrupted HHFKP_1121_uc001bgn.1_1_16
hsa-miR-216a-3p taatctaCACTGTGt UCACAGUG m7b Disrupted HHFKP_1121_uc001bgn.1_1_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser