SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000863
Gene Symbol: HTR1B
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.77463275C>T COSM4004128 SNUH_G26_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273f aggactCCATCTCCc GGAGAUGG m8a Disrupted HPTK1_26262_G31393.1_78173000
hsa-miR-1289 aGGACTCCAtctccc UGGAGUCC m8a (m8a->m7a) HPTK1_26262_G31393.1_78173000
hsa-miR-3198 agGACTCCAtctccc GUGGAGUC m7b (m7b->m6b) HPTK1_26262_G31393.1_78173000
hsa-miR-4294 agGACTCCatctccc GGGAGUCU m6b Disrupted HPTK1_26262_G31393.1_78173000
hsa-miR-4309 agGACTCCAtctccc CUGGAGUC m7b (m7b->m6b) HPTK1_26262_G31393.1_78173000
hsa-miR-4534 aggaCTCCATCtccc GGAUGGAG m7b Disrupted HPTK1_26262_G31393.1_78173000
hsa-miR-6514-5p aggACTCCATctccc UAUGGAGU m7b Disrupted HPTK1_26262_G31393.1_78173000
hsa-miR-8082 aggaCTCCATCtccc UGAUGGAG m7b Disrupted HPTK1_26262_G31393.1_78173000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.77463265C>A COSM1081817 TCGA-AX-A05Z-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3162-5p CTCCCTAAcctggaa UUAGGGAG m8a Created HPTK1_26262_G31393.1_78173000
hsa-miR-4685-5p ctccctaCCCTGGaa CCCAGGGC m6b Disrupted HPTK1_26262_G31393.1_78173000
hsa-miR-6755-5p ctccCTACCCTggaa UAGGGUAG m7b Disrupted HPTK1_26262_G31393.1_78173000
hsa-miR-6837-5p ctccctaCCCTGGaa ACCAGGGC m6b Disrupted HPTK1_26262_G31393.1_78173000
hsa-miR-7113-5p ctccctaCCCTGGAa UCCAGGGA m7a Disrupted HPTK1_26262_G31393.1_78173000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.77463005C>T COSM3875652 TCGA-HU-A4GN-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p cttgTTGCACTGcct CAGUGCAA m8a Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-130b-3p cttgTTGCACTGcct CAGUGCAA m8a Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-148a-3p cttgtTGCACTGcct UCAGUGCA m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-148b-3p cttgtTGCACTGcct UCAGUGCA m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-152-3p cttgtTGCACTGcct UCAGUGCA m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-301a-3p cttgTTGCACTGcct CAGUGCAA m8a Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-301b-3p cttgTTGCACTGcct CAGUGCAA m8a Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-34a-5p cttgttgCACTGCCt UGGCAGUG m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-34c-5p cttgttgCACTGCCt AGGCAGUG m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-3529-3p cTTGTTGTactgcct AACAACAA m7b Created HPKTA_54420_G58805.1_78172725
hsa-miR-3666 cttgTTGCACTGcct CAGUGCAA m8a Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-4295 cttgTTGCACTGcct CAGUGCAA m8a Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-449a cttgttgCACTGCCt UGGCAGUG m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-449b-5p cttgttgCACTGCCt AGGCAGUG m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-454-3p cttgTTGCACTgcct UAGUGCAA m7b Disrupted HPKTA_54420_G58805.1_78172725

Mutation Mutation ID Sample Name Cancer Type
chr6:g.77463002T>C COSM3875651 TCGA-F1-6177-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p gTTGCACTGcctcca CAGUGCAA m8a (m8a->m7a) HPKTA_54420_G58805.1_78172725
hsa-miR-130b-3p gTTGCACTGcctcca CAGUGCAA m8a (m8a->m7a) HPKTA_54420_G58805.1_78172725
hsa-miR-148a-3p gtTGCACTGcctcca UCAGUGCA m7b (m7b->m6b) HPKTA_54420_G58805.1_78172725
hsa-miR-148b-3p gtTGCACTGcctcca UCAGUGCA m7b (m7b->m6b) HPKTA_54420_G58805.1_78172725
hsa-miR-152-3p gtTGCACTGcctcca UCAGUGCA m7b (m7b->m6b) HPKTA_54420_G58805.1_78172725
hsa-miR-1827 gttgcaCTGCCTCca UGAGGCAG m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-2682-5p gttgcACTGCCTcca CAGGCAGU m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-301a-3p gTTGCACTGcctcca CAGUGCAA m8a (m8a->m7a) HPKTA_54420_G58805.1_78172725
hsa-miR-301b-3p gTTGCACTGcctcca CAGUGCAA m8a (m8a->m7a) HPKTA_54420_G58805.1_78172725
hsa-miR-3197 gttgcacCGCCTCCa GGAGGCGC m7a Created HPKTA_54420_G58805.1_78172725
hsa-miR-34a-5p gttgCACTGCCtcca UGGCAGUG m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-34b-5p gttgcACTGCCTcca UAGGCAGU m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-34c-5p gttgCACTGCCTcca AGGCAGUG m8a Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-3612 gttgcacTGCCTCCa AGGAGGCA m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-3666 gTTGCACTGcctcca CAGUGCAA m8a (m8a->m7a) HPKTA_54420_G58805.1_78172725
hsa-miR-4295 gTTGCACTGcctcca CAGUGCAA m8a (m8a->m7a) HPKTA_54420_G58805.1_78172725
hsa-miR-449a gttgCACTGCCtcca UGGCAGUG m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-449b-5p gttgCACTGCCTcca AGGCAGUG m8a Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-449c-5p gttgcACTGCCTcca UAGGCAGU m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-454-3p gTTGCACTgcctcca UAGUGCAA m7b Disrupted HPKTA_54420_G58805.1_78172725
hsa-miR-4746-3p gttGCACCGCctcca AGCGGUGC m7b Created HPKTA_54420_G58805.1_78172725
hsa-miR-6087 gttgcaCCGCCTCca UGAGGCGG m7b Created HPKTA_54420_G58805.1_78172725
hsa-miR-650 gttgcacTGCCTCCa AGGAGGCA m7b Disrupted HPKTA_54420_G58805.1_78172725

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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