SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000414
Gene Symbol: HSD17B4
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119541983G>A COSM5003454 PDA_100 [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.119541972T>C COSM4570030 CSCC-18-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6507-5p atgATTCTTaaagac GAAGAAUA m6b Disrupted HHSJI_2172_Peak1052|6|0.1538|3|NM_000414|HSD17B4
hsa-miR-3658 atgaTTCTTAAAgac UUUAAGAA m8a Disrupted HHSJI_2172_Peak1052|6|0.1538|3|NM_000414|HSD17B4
hsa-miR-3653-3p atgaTTCTTAaagac CUAAGAAG m6b Disrupted HHSJI_2172_Peak1052|6|0.1538|3|NM_000414|HSD17B4
hsa-miR-302d-5p atgattcTTAAAGac ACUUUAAC m6b Disrupted HHSJI_2172_Peak1052|6|0.1538|3|NM_000414|HSD17B4
hsa-miR-302b-5p atgattcTTAAAGac ACUUUAAC m6b Disrupted HHSJI_2172_Peak1052|6|0.1538|3|NM_000414|HSD17B4

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser