SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_172002
Gene Symbol: HSCB
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.28743949C>G COSM726023 TCGA-66-2742-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3138 tctTGTCCACccaga UGUGGACA m7b Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-363-5p tcttgTCCACCCaga CGGGUGGA m7b Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-412-5p tcttGTCGACCcaga UGGUCGAC m7b Created HHFCT_101402_uc003aea.1_2_10
hsa-miR-4483 tcttgtCCACCCaga GGGGUGGU m6b Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-6736-5p tcttgtcCACCCAGa CUGGGUGA m7a Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-6745 tcttgTCCACCCAga UGGGUGGA m8a Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-6756-5p tcttgtCCACCCaga AGGGUGGG m6b Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-6766-5p tcttgtCCACCCaga CGGGUGGG m6b Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-6776-5p tcttgtcCACCCAGa UCUGGGUG m7b Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-8071 tcttGTCCACCcaga CGGUGGAC m7b Disrupted HHFCT_101402_uc003aea.1_2_10
Mutation Mutation ID Sample Name Cancer Type
chr22:g.28743944T>G COSM4402637 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr22:g.28743941G>A COSM1210020 587338 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr22:g.28743931C>G COSM3553060 TCGA-GN-A26C-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-3p gtaCCAGGAactgca CUCCUGGG m6b Created HHFCT_101402_uc003aea.1_2_10
hsa-miR-138-5p gtACCAGCaactgca AGCUGGUG m6b Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-4277 gtaccagGAACTGCa GCAGUUCU m7a Created HHFCT_101402_uc003aea.1_2_10
hsa-miR-584-3p gtaccaGGAACTGca UCAGUUCC m7b Created HHFCT_101402_uc003aea.1_2_10
hsa-miR-6131 gtACCAGCaactgca GGCUGGUC m6b Disrupted HHFCT_101402_uc003aea.1_2_10
hsa-miR-133a-5p gTACCAGCaactgca AGCUGGUA m7b Disrupted HPRO6_51363_G60875.1_29139913
hsa-miR-1343-3p gtaCCAGGAactgca CUCCUGGG m6b Created HPRO6_51363_G60875.1_29139913
hsa-miR-138-5p gtACCAGCaactgca AGCUGGUG m6b Disrupted HPRO6_51363_G60875.1_29139913
hsa-miR-4277 gtaccagGAACTGCa GCAGUUCU m7a Created HPRO6_51363_G60875.1_29139913
hsa-miR-584-3p gtaccaGGAACTGca UCAGUUCC m7b Created HPRO6_51363_G60875.1_29139913
hsa-miR-6131 gtACCAGCaactgca GGCUGGUC m6b Disrupted HPRO6_51363_G60875.1_29139913

Mutation Mutation ID Sample Name Cancer Type
chr22:g.28742156C>A COSM4800392 CHC1591T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-204-3p aggggTTCCCAGaag GCUGGGAA m7b Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-3192-5p aggggtTCCCAGAag UCUGGGAG m7a Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4314 aggggtTCCCAGAag CUCUGGGA m7b Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4490 aggggTTACCAGAag UCUGGUAA m8a Created HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4646-5p aggggTTCCCAGaag ACUGGGAA m7b Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4774-5p aggggtTACCAGAag UCUGGUAU m7a Created HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-619-5p aggggtTCCCAGaag GCUGGGAU m6b Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-6506-5p aggggtTCCCAGaag ACUGGGAU m6b Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-8059 agggGTTCCCagaag GGGGAACU m6b Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-204-3p aggggTTCCCAGaag GCUGGGAA m7b Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-3192-5p aggggtTCCCAGAag UCUGGGAG m7a Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4314 aggggtTCCCAGAag CUCUGGGA m7b Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4490 aggggTTACCAGAag UCUGGUAA m8a Created HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4646-5p aggggTTCCCAGaag ACUGGGAA m7b Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4774-5p aggggtTACCAGAag UCUGGUAU m7a Created HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-619-5p aggggtTCCCAGaag GCUGGGAU m6b Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-6506-5p aggggtTCCCAGaag ACUGGGAU m6b Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-8059 agggGTTCCCagaag GGGGAACU m6b Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317

Mutation Mutation ID Sample Name Cancer Type
chr22:g.28742130T>G COSM4422164 AOCS-160-1-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6840-5p ctCCGGGGGTggggg ACCCCCGG m8a Created HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-6840-5p ctCCGGGGGTggggg ACCCCCGG m8a Created HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317

Mutation Mutation ID Sample Name Cancer Type
chr22:g.28742117G>C COSM3701726 RK105_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1538 agCCGGGCCtttgct CGGCCCGG m7b (m6b->m7b) HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4707-5p aGCCGGGGCtttgct GCCCCGGC m8a (m8a->m7a) HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4745-3p agCCGGGCCtttgct UGGCCCGG m7b (m6b->m7b) HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4747-3p agcCGGGCCTTtgct AAGGCCCG m8a Created HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-6768-3p agccgGGCCTTTGct CAAAGGCC m8a Created HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-1538 agCCGGGCCtttgct CGGCCCGG m7b (m6b->m7b) HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4707-5p aGCCGGGGCtttgct GCCCCGGC m8a (m8a->m7a) HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4745-3p agCCGGGCCtttgct UGGCCCGG m7b (m6b->m7b) HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4747-3p agcCGGGCCTTtgct AAGGCCCG m8a Created HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-6768-3p agccgGGCCTTTGct CAAAGGCC m8a Created HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317

Mutation Mutation ID Sample Name Cancer Type
chr22:g.28742108A>G COSM4593086 SCC-25 [upper_aerodigestive_tract][head_neck][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6741-3p gcgggggAGAGCCGg UCGGCUCU m7b Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-6741-3p gcgggggAGAGCCGg UCGGCUCU m7b Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317

Mutation Mutation ID Sample Name Cancer Type
chr22:g.28742102C>T COSM4605927 2012-1344:2012-1315-T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4258 gatgTGGCGGGGgag CCCCGCCA m8a Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-6840-5p gatgtggCGGGGGag ACCCCCGG m6b Disrupted HHHNA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-4258 gatgTGGCGGGGgag CCCCGCCA m8a Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317
hsa-miR-6840-5p gatgtggCGGGGGag ACCCCCGG m6b Disrupted HHHSA_15578_HSCB|NM_172002|exon_CDS|-2.75029789357681|-0.861672752396317

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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