SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002148
Gene Symbol: HOXD10

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.176117051C>T COSM1669428 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5590-3p gtgcatCTTTATata AAUAAAGU m6b Created HPKMB_4495_G5118.1_176981781
hsa-miR-541-5p gtgcATCCTTatata AAAGGAUU m6b Disrupted HPKMB_4495_G5118.1_176981781
hsa-miR-4662b gtgCATCTTTatata AAAGAUGG m7a Created HPKMB_4495_G5118.1_176981781
hsa-miR-340-5p gtgcatCTTTATAta UUAUAAAG m7b Created HPKMB_4495_G5118.1_176981781
hsa-miR-142-5p gtgcatCTTTATata CAUAAAGU m6b Created HPKMB_4495_G5118.1_176981781

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser