SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_019111
Gene Symbol: HLA-DRA
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32444998C>A COSN9780642 AOCS-034-3-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-5p cctcaaAATGTGAtt UUCACAUU m7b Created HPSLC_16542_G19664.1_32412765
hsa-miR-23a-3p cctcaaAATGTGATt AUCACAUU m8a Created HPSLC_16542_G19664.1_32412765
hsa-miR-23b-3p cctcaaAATGTGATt AUCACAUU m8a Created HPSLC_16542_G19664.1_32412765
hsa-miR-23c cctcaaAATGTGATt AUCACAUU m8a Created HPSLC_16542_G19664.1_32412765
hsa-miR-27a-3p cctcaaACTGTGAtt UUCACAGU m7b Disrupted HPSLC_16542_G19664.1_32412765
hsa-miR-27b-3p cctcaaACTGTGAtt UUCACAGU m7b Disrupted HPSLC_16542_G19664.1_32412765
hsa-miR-3681-3p cctcaaACTGTGatt ACACAGUG m6b Disrupted HPSLC_16542_G19664.1_32412765

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32444891T>C COSN4858797 tumor_4160468 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3163 cATTTTATtatcacc UAUAAAAU m7b Disrupted HHFKP_126456_uc003obh.1_3_12

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32443873G>A COSM1254265 TCGA-EJ-7789-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7i-3p ggaTTGCGCAaaagc CUGCGCAA m7b Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-19a-3p ggaTTGCACAaaagc UGUGCAAA m7a Created HPSEF_19282_G23267.1_32411645
hsa-miR-19b-3p ggaTTGCACAaaagc UGUGCAAA m7a Created HPSEF_19282_G23267.1_32411645
hsa-miR-2113 ggattGCACAAAagc AUUUGUGC m7b Created HPSEF_19282_G23267.1_32411645

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32443869T>G COSM1443623 71 [endometrium][NS][hyperplasia][complex]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7i-3p caagggaTTGCGCAa CUGCGCAA m7b Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-188-5p cAAGGGATtgcgcaa CAUCCCUU m7b Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-623 CAAGGGATtgcgcaa AUCCCUUG m8a Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-6866-3p cAAGGGATtgcgcaa GAUCCCUU m7b Disrupted HPSEF_19282_G23267.1_32411645

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32443854T>G COSM1254267 ESO-171 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4426 gaCCATCTTCatcat GAAGAUGG m8a Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-4647 gaCCATCTTCatcat GAAGAUGG m8a Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-4662b gaCCATCTTcatcat AAAGAUGG m7b (m7b->m6b) HPSEF_19282_G23267.1_32411645
hsa-miR-4699-5p gaccATCTTCatcat AGAAGAUU m6b Disrupted HPSEF_19282_G23267.1_32411645

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32443853C>G COSM596081 TCGA-64-5781-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4426 ggaCCATCTTCatca GAAGAUGG m8a Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-4647 ggaCCATCTTCatca GAAGAUGG m8a Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-4662b ggaCCATCTTcatca AAAGAUGG m7b Disrupted HPSEF_19282_G23267.1_32411645
hsa-miR-4699-5p ggaccATCTTCatca AGAAGAUU m6b Disrupted HPSEF_19282_G23267.1_32411645

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32443259G>A COSM213866 SA210 [breast][NS][carcinoma][basal_(triple-negative)_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4796-5p tttcATAGACAagtt UGUCUAUA m7a Disrupted HHFKP_126454_uc003obh.1_1_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32443258A>C COSM1443621 PTC-10C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3655 gtttcatCGACAAGt GCUUGUCG m7b Created HHFKP_126454_uc003obh.1_1_8
hsa-miR-4796-5p gtttcATAGACAagt UGUCUAUA m7a Disrupted HHFKP_126454_uc003obh.1_1_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32442682C>T COSM3410983 TCGA-HU-A4H4-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-383-5p tatacTCTGATCacc AGAUCAGA m7b Created HPSLB_6291_G7677.1_32410458
hsa-miR-759 tatACTCTGatcacc GCAGAGUG m6b Created HPSLB_6291_G7677.1_32410458

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32442667G>A COSM3872991 TCGA-BR-6802-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-122-5p acaaagCACTCCAac UGGAGUGU m7a Created HPSLB_6291_G7677.1_32410458
hsa-miR-3198 acaaagcACTCCAac GUGGAGUC m6b Created HPSLB_6291_G7677.1_32410458
hsa-miR-4309 acaaagcACTCCAac CUGGAGUC m6b Created HPSLB_6291_G7677.1_32410458
hsa-miR-504-3p acaaaGCACTCCaac GGGAGUGC m7b Created HPSLB_6291_G7677.1_32410458
hsa-miR-520f-3p acaAAGCACTccaac AAGUGCUU m7b Created HPSLB_6291_G7677.1_32410458
hsa-miR-6874-5p acaaagcGCTCCAac AUGGAGCU m6b Disrupted HPSLB_6291_G7677.1_32410458

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32442666C>T COSM3872990 TCGA-CG-4305-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6081 gacaaagTGCTCCaa AGGAGCAG m6b Created HPSLB_6291_G7677.1_32410458

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32442659G>A COSM71078 TCGA-09-2050-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-433-3p aaATCATGAcaaagc AUCAUGAU m7b (m7b->m6b) HPSLB_6291_G7677.1_32410458

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32442599C>A COSM1254266 ESO-1594 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3126-3p ttGCCAGATttgagg CAUCUGGC m7b (m6b->m7b) HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-3128 TTGCCAGAtttgagg UCUGGCAA m8a Created HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-320a ttgcCAGCTTTgagg AAAAGCUG m7b Disrupted HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-320b ttgcCAGCTTTgagg AAAAGCUG m7b Disrupted HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-320c ttgcCAGCTTTgagg AAAAGCUG m7b Disrupted HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-320d ttgcCAGCTTTgagg AAAAGCUG m7b Disrupted HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-320e ttgCCAGCTTTgagg AAAGCUGG m8a Disrupted HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-330-3p ttgccaGCTTTGagg GCAAAGCA m6b Disrupted HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-372-5p ttgccagATTTGAGg CCUCAAAU m7b Created HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-4429 ttgcCAGCTTTgagg AAAAGCUG m7b Disrupted HHRBL_12308_BCBL1-2of3-SCL_6624
hsa-miR-4762-5p ttgccAGATTTGagg CCAAAUCU m7b Created HHRBL_12308_BCBL1-2of3-SCL_6624
Mutation Mutation ID Sample Name Cancer Type
chr6:g.32442589G>A COSM3625442 TCGA-EE-A29R-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32442584T>C COSM3625441 TCGA-EE-A29S-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32439969C>T COSM1312056 CSCC-6-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-211-3p tggaGTCCCTGtgct GCAGGGAC m7b Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32439954G>A COSM3872987 TCGA-BR-A4QL-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3187-3p gaaaATGGCCAtaag UUGGCCAU m7b Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-4435 gaaaaTGGCCATaag AUGGCCAG m7a Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-4529-5p gaaaATGGCCataag AGGCCAUC m6b Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-548s gaaaaTGGCCATaag AUGGCCAA m7a Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-5587-5p gaaaaTGACCATaag AUGGUCAC m7a Created HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-8074 gaaaatgGCCATAag CUAUGGCG m6b Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32439932C>A COSN8871583 SNUH_G16_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1267 ctccCAACAGagcgc CCUGUUGA m6b Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-3122 cTCCCAACagagcgc GUUGGGAC m7a Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-3147 ctCCCAACagagcgc GGUUGGGC m6b Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-367-5p ctccCAACAGagcgc ACUGUUGC m6b Disrupted HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-3913-5p cTCCCAAAagagcgc UUUGGGAC m7a Created HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-4425 cTCCCAACAgagcgc UGUUGGGA m8a (m8a->m7a) HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-6513-5p cTCCCAAAagagcgc UUUGGGAU m7a Created HHRBL_12307_BCBL1-2of3-SCL_4150
hsa-miR-6812-3p ctcccaaAAGAGCGc CCGCUCUU m7b Created HHRBL_12307_BCBL1-2of3-SCL_4150

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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