SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
	Home	Search	Help	Download

Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_002123
Gene Symbol:	HLA-DQB1
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr6:g.32666680T>A		COSN1331730	HCC64T	[liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-6507-5p	ttTATTCTTtctgcc	GAAGAAUA	m7b	(m7b->m6b)	HPCB1_35086_G44958.1_32634451
hsa-miR-186-5p	tttATTCTTTctgcc	CAAAGAAU	m7b	Disrupted	HPRO6_67840_G80969.1_32634460
hsa-miR-186-5p	tttATTCTTTctgcc	CAAAGAAU	m7b	Disrupted	HPCB1_35086_G44958.1_32634451
hsa-miR-6507-5p	ttTATTCTTtctgcc	GAAGAAUA	m7b	(m7b->m6b)	HPRO6_67840_G80969.1_32634460
hsa-miR-186-5p	tttATTCTTTctgcc	CAAAGAAU	m7b	Disrupted	HPRO8_12899_G17222.1_32634451
hsa-miR-6507-5p	ttTATTCTTtctgcc	GAAGAAUA	m7b	(m7b->m6b)	HPRO8_12899_G17222.1_32634451
hsa-miR-6507-5p	ttTATTCTTtctgcc	GAAGAAUA	m7b	(m7b->m6b)	HPCB1_35086_G44958.1_32634451
hsa-miR-186-5p	tttATTCTTTctgcc	CAAAGAAU	m7b	Disrupted	HPRO6_67840_G80969.1_32634460
hsa-miR-186-5p	tttATTCTTTctgcc	CAAAGAAU	m7b	Disrupted	HPCB1_35086_G44958.1_32634451
hsa-miR-6507-5p	ttTATTCTTtctgcc	GAAGAAUA	m7b	(m7b->m6b)	HPRO6_67840_G80969.1_32634460
hsa-miR-186-5p	tttATTCTTTctgcc	CAAAGAAU	m7b	Disrupted	HPRO8_12899_G17222.1_32634451
hsa-miR-6507-5p	ttTATTCTTtctgcc	GAAGAAUA	m7b	(m7b->m6b)	HPRO8_12899_G17222.1_32634451

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser