SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001005464
Gene Symbol: HIST2H3A

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr1:g.149852876G>A COSM3930378 B109-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.149840943T>G COSM2156441 TCGA-19-2631 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7977 cgGCTGGGAcgcgag UUCCCAGC m7b (m6b->m7b) HPRO6_7536_G8747.1_149812505
hsa-miR-6849-3p cGGCTGGTacgcgag ACCAGCCU m7a Disrupted HPRO6_7536_G8747.1_149812505
hsa-miR-634 cgGCTGGTacgcgag AACCAGCA m6b Disrupted HPRO6_7536_G8747.1_149812505

Mutation Mutation ID Sample Name Cancer Type
chr1:g.149840936G>A COSM3930375 B109-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser