SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003537
Gene Symbol: HIST1H3B
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031739A>G COSM3829813 TCGA-D8-A1J8-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3657 tgaGGACACAaacct UGUGUCCC m7a Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-4669 tgaGGACACAaacct UGUGUCCG m7a Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-5010-3p tgaggACACAAAcct UUUUGUGU m7b Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-5087 tgaggacACAAACCt GGGUUUGU m7b Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-592 tgagGACACAAacct UUGUGUCA m7a Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-599 tgagGACACAAacct GUUGUGUC m7b Disrupted HPRO7_2669_G4304.1_26031957

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031738C>T COSM4628505 Gp2D [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3657 gaGGACACAaacctt UGUGUCCC m7a (m7a->m6a) HPRO7_2669_G4304.1_26031957
hsa-miR-4464 gaggacaCAAACCTt AAGGUUUG m7b Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-4669 gaGGACACAaacctt UGUGUCCG m7a (m7a->m6a) HPRO7_2669_G4304.1_26031957
hsa-miR-4748 gaggacaCAAACCTt GAGGUUUG m7b Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-5010-3p gaggACACAAAcctt UUUUGUGU m7b Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-5087 gaggacACAAACCtt GGGUUUGU m7b Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-592 gagGACACAAacctt UUGUGUCA m7a Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-599 gagGACACAAacctt GUUGUGUC m7b Disrupted HPRO7_2669_G4304.1_26031957
hsa-miR-6834-3p gaGGACATAaacctt UAUGUCCC m7a (m6a->m7a) HPRO7_2669_G4304.1_26031957

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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