SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002105
Gene Symbol: H2AFX
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.119095272C>T COSM428534 TCGA-C8-A1HM-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1307-3p actaCGCCGAGcgcg ACUCGGCG m7b Disrupted HHKTB_1208_NM_002105|166|205|58.4281582284251|10.9340488776868

Mutation Mutation ID Sample Name Cancer Type
chr11:g.119095271G>A COSM1746074 B80-13 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1307-3p ctaCGCCGAGcgcgt ACUCGGCG m7b Disrupted HHKTB_1208_NM_002105|166|205|58.4281582284251|10.9340488776868

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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