SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099650
Gene Symbol: GXYLT1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.42087050G>T COSN5943457 RK176_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8061 gATCTAAGattgtta CUUAGAUU m7a Disrupted HPSLC_4838_G5745.1_42480855
hsa-miR-338-5p gatctaATATTGTTa AACAAUAU m8a Created HPSLC_4838_G5745.1_42480855
hsa-miR-195-3p gatctAATATTGtta CCAAUAUU m7b Created HPSLC_4838_G5745.1_42480855
hsa-miR-16-2-3p gatctAATATTGtta CCAAUAUU m7b Created HPSLC_4838_G5745.1_42480855

Mutation Mutation ID Sample Name Cancer Type
chr12:g.42082973C>G COSN1572979 RK071_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548m atctcACCTTTaata CAAAGGUA m6b Disrupted HPSLC_4834_G5741.1_42476769
hsa-miR-4735-3p atctCACCTTTaata AAAGGUGC m7a Disrupted HPSLC_4834_G5741.1_42476769

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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