SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001278940
Gene Symbol: GTF2A1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.81180305A>C COSM958346 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203a-3p aaatggaCATTTCAt GUGAAAUG m7b Created HPSLC_6468_G7662.1_81646649
hsa-miR-3606-3p aaatgGAAATTTcat AAAAUUUC m7b Disrupted HPSLB_2485_G2998.1_81646647
hsa-miR-3912-5p aaATGGACATttcat AUGUCCAU m8a Created HPSLB_2485_G2998.1_81646647
hsa-miR-513a-3p aaatgGAAATTTcat UAAAUUUC m7b Disrupted HPSLB_2485_G2998.1_81646647
hsa-miR-513c-3p aaatgGAAATTTcat UAAAUUUC m7b Disrupted HPSLB_2485_G2998.1_81646647
hsa-miR-203a-3p aaatggaCATTTCAt GUGAAAUG m7b Created HPSLB_2485_G2998.1_81646647
hsa-miR-3606-3p aaatgGAAATTTcat AAAAUUUC m7b Disrupted HPSLC_6468_G7662.1_81646649
hsa-miR-3912-5p aaATGGACATttcat AUGUCCAU m8a Created HPSLC_6468_G7662.1_81646649
hsa-miR-513a-3p aaatgGAAATTTcat UAAAUUUC m7b Disrupted HPSLC_6468_G7662.1_81646649
hsa-miR-513c-3p aaatgGAAATTTcat UAAAUUUC m7b Disrupted HPSLC_6468_G7662.1_81646649
hsa-miR-203a-3p aaatggaCATTTCAt GUGAAAUG m7b Created HPRT3_8754_G11523.1_81646634
hsa-miR-3606-3p aaatgGAAATTTcat AAAAUUUC m7b Disrupted HPCB1_13301_G16764.1_81646660
hsa-miR-3912-5p aaATGGACATttcat AUGUCCAU m8a Created HPCB1_13301_G16764.1_81646660
hsa-miR-513a-3p aaatgGAAATTTcat UAAAUUUC m7b Disrupted HPCB1_13301_G16764.1_81646660
hsa-miR-513c-3p aaatgGAAATTTcat UAAAUUUC m7b Disrupted HPCB1_13301_G16764.1_81646660
hsa-miR-203a-3p aaatggaCATTTCAt GUGAAAUG m7b Created HPCB1_13301_G16764.1_81646660
hsa-miR-3606-3p aaatgGAAATTTcat AAAAUUUC m7b Disrupted HPRT3_8754_G11523.1_81646634
hsa-miR-3912-5p aaATGGACATttcat AUGUCCAU m8a Created HPRT3_8754_G11523.1_81646634
hsa-miR-513a-3p aaatgGAAATTTcat UAAAUUUC m7b Disrupted HPRT3_8754_G11523.1_81646634
hsa-miR-513c-3p aaatgGAAATTTcat UAAAUUUC m7b Disrupted HPRT3_8754_G11523.1_81646634

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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