SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0020177
Gene Symbol: GRK5
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.119423213G>A COSM4884449 OSCC-GB_01080111 [upper_aerodigestive_tract][mouth][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6749-3p cccagacGGAGGAGa CUCCUCCC m7a Disrupted HHFKP_22109_uc001led.1_65_16
hsa-miR-6780a-3p cccagaCAGAGGAGa CUCCUCUG m8a Created HHFKP_22109_uc001led.1_65_16
hsa-miR-6792-3p cccagacGGAGGAGa CUCCUCCA m7a Disrupted HHFKP_22109_uc001led.1_65_16
hsa-miR-6827-3p cccAGACGGaggaga ACCGUCUC m6b Disrupted HHFKP_22109_uc001led.1_65_16
hsa-miR-6888-3p cccAGACAGAggaga AUCUGUCU m7b Created HHFKP_22109_uc001led.1_65_16
hsa-miR-1231 cCCAGACAgaggaga GUGUCUGG m7b Created HHFKP_22109_uc001led.1_65_16
hsa-miR-3120-5p ccCAGACAGaggaga CCUGUCUG m7b (m6b->m7b) HHFKP_22109_uc001led.1_65_16
hsa-miR-3605-3p cccagACGGAGGaga CCUCCGUG m7a Disrupted HHFKP_22109_uc001led.1_65_16

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119423212CGGA>C COSM915350 TCGA-B5-A0JR-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6827-3p tcccAGACGGaggagaag ACCGUCUC m6b Disrupted HHFKP_22109_uc001led.1_65_16
hsa-miR-3605-3p tcccagACGGAGGagaag CCUCCGUG m7a Disrupted HHFKP_22109_uc001led.1_65_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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