SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_175611
Gene Symbol: GRIK1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.29645115G>A COSN5984612 RK150_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-592 gtgccTGACACAtag UUGUGUCA m7b Created HHFKP_90878_cluster-15018_2_17
hsa-miR-550b-2-5p gtgcctGGCACATag AUGUGCCU m7a Disrupted HHFKP_90878_cluster-15018_2_17
hsa-miR-511-3p gtgcctgACACATag AAUGUGUA m6b Created HHFKP_90878_cluster-15018_2_17
hsa-miR-5006-5p gtgCCTGGCAcatag UUGCCAGG m7b Disrupted HHFKP_90878_cluster-15018_2_17
hsa-miR-4755-3p gtGCCTGGCacatag AGCCAGGC m7b (m7b->m6b) HHFKP_90878_cluster-15018_2_17
hsa-miR-1202 gtgcCTGGCACatag GUGCCAGC m7a Disrupted HHFKP_90878_cluster-15018_2_17
hsa-miR-4673 gTGCCTGGcacatag UCCAGGCA m7b Disrupted HHFKP_90878_cluster-15018_2_17
hsa-miR-4645-5p gTGCCTGGcacatag ACCAGGCA m7b Disrupted HHFKP_90878_cluster-15018_2_17
hsa-miR-455-5p gtgcctGGCACATAg UAUGUGCC m8a Disrupted HHFKP_90878_cluster-15018_2_17
hsa-miR-1227-3p gtgccTGGCACatag CGUGCCAC m6b Disrupted HHFKP_90878_cluster-15018_2_17

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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