SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0065638
Gene Symbol: GPX1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.49358262T>G COSM4158144 PTC-53C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6743-3p gctcggcGAGCGGCg AGCCGCUC m7b Created HHHNA_16411_GPX1|NM_201397|exon_utr5|-1.56353090058396|0.388711845385302
hsa-miR-6743-3p gctcggcGAGCGGCg AGCCGCUC m7b Created HHHSA_16411_GPX1|NM_201397|exon_utr5|-1.56353090058396|0.388711845385302

Mutation Mutation ID Sample Name Cancer Type
chr3:g.49358261A>G COSM4158143 PTC-53C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3194-5p ctcGGCTGGCggcgg GGCCAGCC m7b Created HHHNA_16411_GPX1|NM_201397|exon_utr5|-1.56353090058396|0.388711845385302
hsa-miR-3194-5p ctcGGCTGGCggcgg GGCCAGCC m7b Created HHHSA_16411_GPX1|NM_201397|exon_utr5|-1.56353090058396|0.388711845385302
Mutation Mutation ID Sample Name Cancer Type
chr3:g.49358255G>A COSM3746634 HCC99T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.49358153C>A COSM4439953 T2578 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4684-5p tacttaTAGAGAatg CUCUCUAC m6b Created HPRO6_55148_G65592.1_49395588

Mutation Mutation ID Sample Name Cancer Type
chr3:g.49358112A>C COSM3408740 TCGA-41-2572-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1289 cgGGACTCCAcccag UGGAGUCC m8a Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-3198 cggGACTCCACccag GUGGAGUC m8a Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-363-5p cgggacTCCACCCag CGGGUGGA m7b Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-4294 cggGACTCCacccag GGGAGUCU m6b Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-4309 cggGACTCCAcccag CUGGAGUC m7b Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-4455 cgggactACACCCag AGGGUGUG m6b Disrupted HHFCT_104307_uc003cws.1_2_16
hsa-miR-4483 cgggactCCACCCag GGGGUGGU m6b Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-609 cgggactACACCCag AGGGUGUU m6b Disrupted HHFCT_104307_uc003cws.1_2_16
hsa-miR-6745 cgggacTCCACCCAg UGGGUGGA m8a Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-6756-5p cgggactCCACCCag AGGGUGGG m6b Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-6766-5p cgggactCCACCCag CGGGUGGG m6b Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-6772-5p cgggacTACACCCAg UGGGUGUA m8a Disrupted HHFCT_104307_uc003cws.1_2_16
hsa-miR-6880-5p cgggaCTCCACCcag UGGUGGAG m7b Created HHFCT_104307_uc003cws.1_2_16
hsa-miR-1289 cgGGACTCCAcccag UGGAGUCC m8a Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-3198 cggGACTCCACccag GUGGAGUC m8a Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-363-5p cgggacTCCACCCag CGGGUGGA m7b Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-4294 cggGACTCCacccag GGGAGUCU m6b Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-4309 cggGACTCCAcccag CUGGAGUC m7b Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-4455 cgggactACACCCag AGGGUGUG m6b Disrupted HHFKP_96851_uc003cws.1_3_212
hsa-miR-4483 cgggactCCACCCag GGGGUGGU m6b Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-609 cgggactACACCCag AGGGUGUU m6b Disrupted HHFKP_96851_uc003cws.1_3_212
hsa-miR-6745 cgggacTCCACCCAg UGGGUGGA m8a Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-6756-5p cgggactCCACCCag AGGGUGGG m6b Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-6766-5p cgggactCCACCCag CGGGUGGG m6b Created HHFKP_96851_uc003cws.1_3_212
hsa-miR-6772-5p cgggacTACACCCAg UGGGUGUA m8a Disrupted HHFKP_96851_uc003cws.1_3_212
hsa-miR-6880-5p cgggaCTCCACCcag UGGUGGAG m7b Created HHFKP_96851_uc003cws.1_3_212
Mutation Mutation ID Sample Name Cancer Type
chr3:g.49357585G>A COSM1538225 TCGA-55-7727-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.49357563A>G COSM4688355 T1154 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p atgaccGGCCCCAag GUGGGGCC m7b Created HHFKP_96850_uc003cws.1_2_80
hsa-miR-128-1-5p atgacCGGCCCCaag CGGGGCCG m7b Created HHFKP_96850_uc003cws.1_2_80
hsa-miR-128-2-5p atgacCGGCCCCaag GGGGGCCG m7b Created HHFKP_96850_uc003cws.1_2_80
hsa-miR-3170 atgaccgACCCCAag CUGGGGUU m6b Disrupted HHFKP_96850_uc003cws.1_2_80
hsa-miR-4260 atgaccgGCCCCAAg CUUGGGGC m7b Created HHFKP_96850_uc003cws.1_2_80
hsa-miR-5572 atgaccgACCCCAAg GUUGGGGU m7b Disrupted HHFKP_96850_uc003cws.1_2_80
hsa-miR-615-5p atgaccGACCCCaag GGGGGUCC m6b Disrupted HHFKP_96850_uc003cws.1_2_80
hsa-miR-6762-5p atgaccGGCCCCaag CGGGGCCA m6b Created HHFKP_96850_uc003cws.1_2_80
hsa-miR-6781-5p atgaCCGGCCCcaag CGGGCCGG m7b Created HHFKP_96850_uc003cws.1_2_80
hsa-miR-6812-5p atgaccgACCCCAag AUGGGGUG m6b Disrupted HHFKP_96850_uc003cws.1_2_80
hsa-miR-6845-5p atgaccGGCCCCaag CGGGGCCA m6b Created HHFKP_96850_uc003cws.1_2_80
hsa-miR-7704 atgacCGACCCCaag CGGGGUCG m7b Disrupted HHFKP_96850_uc003cws.1_2_80

Mutation Mutation ID Sample Name Cancer Type
chr3:g.49357555C>T COSM3595269 TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27b-5p ccccAAGCTCatcac AGAGCUUA m6b Disrupted HHFKP_96850_uc003cws.1_2_80
hsa-miR-4453 ccCCAAGCTCatcac GAGCUUGG m8a Disrupted HHFKP_96850_uc003cws.1_2_80
hsa-miR-4538 ccCCAAGCTCatcac GAGCUUGG m8a Disrupted HHFKP_96850_uc003cws.1_2_80
hsa-miR-556-5p ccccaAGCTCATCac GAUGAGCU m8a Disrupted HHFKP_96850_uc003cws.1_2_80

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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